Factsheet for Bra024161.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30233	Canola	mitochondrion	98.97	98.97
AT4G29150.1	Thale cress	mitochondrion	84.28	81.95
VIT_11s0016g03030.t01	Wine grape	cytosol	51.29	45.75
KRH60203	Soybean	cytosol, mitochondrion	40.72	43.89
KRH74242	Soybean	cytosol, mitochondrion	46.65	43.1
KRH41488	Soybean	cytosol, mitochondrion	46.13	41.05
Solyc12g008520.1.1	Tomato	cytosol	43.04	40.83
Bra022163.1-P	Field mustard	cytosol	39.69	39.79
KRH48992	Soybean	endoplasmic reticulum	34.54	39.65
Bra021181.1-P	Field mustard	cytosol	39.69	39.59
Bra001633.1-P	Field mustard	cytosol	37.89	39.41
Bra014304.1-P	Field mustard	cytosol, mitochondrion	29.12	38.97
Bra012855.1-P	Field mustard	mitochondrion	10.31	38.84
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	35.31	37.13
Os05t0187500-01	Rice	cytosol	44.33	36.6
TraesCS1B01G142100.1	Wheat	cytosol	42.53	36.34
TraesCS1D01G123800.1	Wheat	cytosol	42.53	36.34
TraesCS1A01G122900.1	Wheat	cytosol, plastid	42.27	36.12
Os01t0190500-01	Rice	cytosol, mitochondrion	43.04	35.91
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	37.37	35.89
PGSC0003DMT400000953	Potato	cytosol	33.51	35.71
Bra030407.1-P	Field mustard	cytosol	30.93	35.61
GSMUA_AchrUn_...	Banana	cytosol	34.54	35.36
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	42.53	35.33
TraesCS3B01G127100.1	Wheat	cytosol	42.01	35.21
GSMUA_Achr10P...	Banana	cytosol	39.95	35.15
TraesCS3D01G109900.1	Wheat	cytosol, mitochondrion	41.75	35.14
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	36.6	34.98
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	33.51	34.67
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	32.99	33.95
EES02320	Sorghum	mitochondrion	41.75	33.75
Zm00001d010366_P001	Maize	cytosol, mitochondrion	40.72	33.69
Zm00001d037688_P001	Maize	mitochondrion	39.95	33.55
KXG21487	Sorghum	cytosol, mitochondrion	42.01	33.06
Zm00001d039510_P001	Maize	cytosol, mitochondrion	40.72	32.85
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	33.51	32.5
Zm00001d008819_P001	Maize	mitochondrion	38.66	32.19
HORVU1Hr1G028250.6	Barley	mitochondrion	42.78	31.5
Bra005929.1-P	Field mustard	plastid	26.29	29.74
Bra009281.1-P	Field mustard	mitochondrion	26.55	29.1
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	42.01	28.45
Bra036812.1-P	Field mustard	mitochondrion	10.05	25.32
Bra039715.1-P	Field mustard	nucleus, plastid	23.97	25.14
Bra010055.1-P	Field mustard	plastid	26.03	24.94
Bra013672.1-P	Field mustard	mitochondrion, nucleus	29.38	22.98
Bra036898.1-P	Field mustard	cytosol	21.39	22.68
Bra020822.1-P	Field mustard	mitochondrion, plastid	24.48	22.62
Bra019337.1-P	Field mustard	nucleus	26.29	21.66
Bra028807.1-P	Field mustard	mitochondrion	20.36	20.79
Bra009498.1-P	Field mustard	cytosol, mitochondrion	20.1	20.42
Bra023414.1-P	Field mustard	nucleus	17.78	17.47
Bra006201.1-P	Field mustard	nucleus	17.53	15.21
Bra008163.1-P	Field mustard	cytosol	17.01	12.79
Bra025690.1-P	Field mustard	cytosol, mitochondrion	17.01	11.7
Bra026581.1-P	Field mustard	cytosol	16.24	10.9
Bra017409.1-P	Field mustard	cytosol, plastid	14.95	10.27
Bra016536.1-P	Field mustard	nucleus	17.53	10.1
Bra024806.1-P	Field mustard	cytosol, plastid	15.21	10.09
Bra016490.1-P	Field mustard	nucleus	18.3	9.61
Bra019653.1-P	Field mustard	cytosol	14.69	9.08
Bra025777.1-P	Field mustard	nucleus, plastid	17.27	9.01

Protein Annotations

EnsemblPlants:Bra024161.1	EnsemblPlants:Bra024161.1-P	EnsemblPlantsGene:Bra024161	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295	PANTHER:PTHR32295:SF22
PFAM:PF00612	PFscan:PS50096	SEG:seg	SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI0002540CB5
UniProt:M4E5V7	MapMan:35.2	:	:	:	:

Description

AT4G29150 (E=9e-153) IQD25 | IQD25 (IQ-domain 25); calmodulin binding

Coordinates

chrA03:+:27240398..27242105

Molecular Weight (calculated)

41693.5 Da

IEP (calculated)

11.339

GRAVY (calculated)

-0.386

Length

388 amino acids

Sequence
(BLAST)

001: MGRATRWFRG LFGIKHSSCS GSGTISNRID RSSLAGVSLC DSYETIPPNI SEREAAWLRS FYAAGEEEIE RRAHAVAVAA ATAAAADVAV AAAKAAAAVV
101: RLTGQGKSGP LAVGNGRENR AAMQIQCTFR GYLARKALRA LKGVVKIQAL VRGFLVRKQA AATLRSMEAL VRAQATVKFQ RALRRIGNTA PARKSTERFS
201: GSLENRNNGE ETAKIVEVDT GIRPGHYRLR VPVLSGSDFL DNPFRRTLSS PLSGRVPPRL SMPKPEWEDC SSKFPTAQST PRYAGGSPAR NVCCSGGGVE
301: AEADAEVDAH QLCFLSGEFH SNFTTDTTSF RGRLRSHSAP RQRPGINAAG SGWRRGVGGY GGVRGQRPSC SGVREAVVGN IERRRAHW

Best Arabidopsis Sequence Match ( AT4G29150.1 )
(BLAST)

001: MRKNLTKLTR VKRETKMGRA TRWFKGLFGI KPSSCSGTDS GTISNRLDRS LCDSYETIPP NISEKEAAWL RSFYAAGEEE KERRTHAIAV AAATAAAADA
101: AVAAAKAAAA VVRLQGQGKS GPLGGGKSRE HRAAMQIQCA FRGYLARKAL RALRGVVKIQ ALVRGFLVRN QAAATLRSME ALVRAQKTVK IQRALRRNGN
201: AAPARKSTER FSGSLENRNN GEETAKIVEV DTGTRPGTYR IRAPVLSGSD FLDNPFRRTL SSPLSGRVPP RLSMPKPEWE ECSSKFPTAQ STPRFSGGSP
301: ARSVCCSGGG VEAEVDTEAD ANRFCFLSGE FNSGYMADTT SFRAKLRSHS APRQRPESNA SAGGWRRSIG GGGVRMQRQS CSGVREAVVG NIERRRMRW

Arabidopsis Description

IQD25IQ-domain 25 [Source:UniProtKB/TrEMBL;Acc:F4JMV6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.