Factsheet for Bra008163.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra019756.1-P
Bra026976.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G74690.1	Bra019756.1-P	AT1G12310.1	21798944
AT1G74690.1	Bra026976.1-P	AT1G12310.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G74690.1	Thale cress	cytosol	81.4	71.55
Bra025690.1-P	Field mustard	cytosol, mitochondrion	63.57	58.16
Bra016536.1-P	Field mustard	nucleus	64.34	49.33
PGSC0003DMT400003322	Potato	cytosol	39.53	36.56
Solyc02g087760.2.1	Tomato	nucleus	38.76	35.97
Bra012855.1-P	Field mustard	mitochondrion	7.17	35.92
Bra026581.1-P	Field mustard	cytosol	34.69	30.97
Bra017409.1-P	Field mustard	cytosol, plastid	32.75	29.91
Bra024806.1-P	Field mustard	cytosol, plastid	32.56	28.72
Bra036812.1-P	Field mustard	mitochondrion	7.95	26.62
Bra014304.1-P	Field mustard	cytosol, mitochondrion	13.37	23.79
Bra019653.1-P	Field mustard	cytosol	28.49	23.41
Bra009281.1-P	Field mustard	mitochondrion	15.5	22.6
Bra023414.1-P	Field mustard	nucleus	17.05	22.28
Bra039715.1-P	Field mustard	nucleus, plastid	15.89	22.16
Bra005929.1-P	Field mustard	plastid	14.15	21.28
Bra036898.1-P	Field mustard	cytosol	14.92	21.04
Bra006201.1-P	Field mustard	nucleus	18.02	20.81
Bra030407.1-P	Field mustard	cytosol	12.98	19.88
Bra001633.1-P	Field mustard	cytosol	13.95	19.3
Bra010055.1-P	Field mustard	plastid	15.12	19.26
Bra021181.1-P	Field mustard	cytosol	14.34	19.02
Bra022163.1-P	Field mustard	cytosol	14.15	18.86
Bra024161.1-P	Field mustard	mitochondrion	12.79	17.01
Bra020822.1-P	Field mustard	mitochondrion, plastid	12.98	15.95
Bra013672.1-P	Field mustard	mitochondrion, nucleus	15.12	15.73
Bra028807.1-P	Field mustard	mitochondrion	11.24	15.26
Bra016490.1-P	Field mustard	nucleus	21.71	15.16
Bra019337.1-P	Field mustard	nucleus	13.57	14.86
Bra009498.1-P	Field mustard	cytosol, mitochondrion	10.66	14.4
Bra025777.1-P	Field mustard	nucleus, plastid	20.35	14.11

Protein Annotations

MapMan:35.1	EnsemblPlantsGene:Bra008163	EnsemblPlants:Bra008163.1	EnsemblPlants:Bra008163.1-P	ncoils:Coil	InterPro:DUF4005
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0005856	GO:GO:0005875	GO:GO:0005886	GO:GO:0016020
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	UniProt:M4CVB6	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF13178
PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF14	SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI0002545960
SEG:seg	:	:	:	:	:

Description

AT1G74690 (E=6e-088) IQD31 | IQD31 (IQ-domain 31); calmodulin binding

Coordinates

chrA02:-:13528749..13530827

Molecular Weight (calculated)

56929.6 Da

IEP (calculated)

10.394

GRAVY (calculated)

-0.793

Length

516 amino acids

Sequence
(BLAST)

001: MGKPAKWFKN VLLGKKSSKS SNGSKGYERV VSGNELVVTA KVEESDVVSQ HVEPEEISDD EIHLPESKPA DSQNAAPVQD KSLSDAERIQ QEIAATLVQA
101: AFRGYLARRA FWALKGIIRL QALIRGHLVR RQAVSTLCCV MGMVKLQALA RGKEIRNSHI GVQVARKCRL KMLQENKVVN STDAYLGIKK LTANAFALKL
201: LASSPKVMPV HIPYDSSNPN SSSIWLESWS ASCFWKPVPQ PKKTIGRRVT EAETAKPKKS ASVQTSFEFG KHKRSFRKVP SQSVEPPAVE DPQVELEKVK
301: RGLRKVHNPV VESSIRPQPV PHIEVEETKH ETIEEAVKVF EENKKQEVPE QPDEVEVHTP GPLETNEALD SSLVNQIGEA KDATEEKTTK PNSKESSAGK
401: ENQKSRRKGS ATNKTEREES NGHHHQTSPS IPSYMQATKS AKAKLRLQGS PKSAEQDGTE KANVPRRHSL PSSGNGRMTS SSPRTTRLAS SGDKTGNKKE
501: KPLLSSAKTT PVERKR

Best Arabidopsis Sequence Match ( AT1G74690.1 )
(BLAST)

001: MGKSTKWLKN VLLGKKTSKS SGSKDKERVV SGKEVLVTSK VEESDVVSDL PSFEVAETNT VDRSGGMLET QNVGPEEISD DEIELPEGKS TDSQNVAPVQ
101: DHSLSDAERI QREIAATSVQ AAFRGYLARR AFWALKGIIR LQALIRGHLV RRQAVATLFS VMGIVRLQAF ARGREIRKSD IGVQVYRKCR LQLLQGNKLA
201: NPTDAYLGIK KLTANAFAQK LLASSPKVLP VHAYDTSNPN SNLIWLENWS ASCFWKPVPQ PKKTISRKPQ NRLLVEAESA KPKKSVRKVP ASNFESSSVQ
301: TSFEFEKPKR SFRKVSSQSI EPPAVEDPQI ELEKVKRSLR KVHNPVVESS IQPQRSPRKE VEKPKLGVEK TRESSYPLVH ETAEEPVNVC DEKKKQEISE
401: QPEEEVHALE MEVHTPGPLE TNEALDSSLV NQIDSNEKAM VEEKPSMEKD TKEEKTPKPN NKENSAGKEN QKSRKKGSAT SKTEREESNG HHETSPSIPS
501: YMQATKSAKA KLRLQGSPKS AEQDGTEKAT VPRRHSLPSP GNGRITSHSP RTTRLANSGD KTGNKKEKPL LSSREGNAKT TPAERKR

Arabidopsis Description

IQD31Protein IQ-DOMAIN 31 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4D8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.