Factsheet for Bra024806.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45197	Canola	nucleus, plastid	96.41	96.74
Bra017409.1-P	Field mustard	cytosol, plastid	78.8	81.59
Bra026581.1-P	Field mustard	cytosol	78.97	79.93
AT2G02790.1	Thale cress	cytosol	79.66	73.27
Bra019653.1-P	Field mustard	cytosol	50.43	46.97
Solyc05g007130.2.1	Tomato	cytosol, plastid	32.99	35.03
PGSC0003DMT400045444	Potato	cytosol, plastid	33.16	34.89
GSMUA_Achr8P26180_001	Banana	mitochondrion	30.26	33.71
Os05t0535900-01	Rice	cytosol	32.99	33.62
Zm00001d038838_P001	Maize	mitochondrion	32.48	33.1
KRH74806	Soybean	cytosol, plastid	31.79	33.04
Bra012855.1-P	Field mustard	mitochondrion	5.81	33.01
KXG22418	Sorghum	cytosol, plastid	32.48	32.82
Zm00001d011138_P003	Maize	cytosol, plastid	32.99	32.66
Bra008163.1-P	Field mustard	cytosol	28.72	32.56
KRH69321	Soybean	cytosol, mitochondrion	30.94	32.15
KRG99144	Soybean	cytosol, plastid	29.57	31.63
GSMUA_AchrUn_...	Banana	mitochondrion	27.35	31.62
TraesCS1B01G374100.2	Wheat	cytosol, mitochondrion	31.28	31.61
KRH45861	Soybean	plastid	29.4	31.44
KXG33252	Sorghum	cytosol	29.74	31.13
TraesCS1D01G361800.3	Wheat	cytosol, mitochondrion, plastid	30.77	31.09
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	30.77	31.09
HORVU1Hr1G080360.4	Barley	mitochondrion	30.94	30.73
Bra025690.1-P	Field mustard	cytosol, mitochondrion	28.89	29.96
Zm00001d043655_P002	Maize	mitochondrion	29.4	29.91
Os01t0716200-01	Rice	nucleus	29.23	29.79
TraesCS3A01G244100.1	Wheat	cytosol, plastid	27.69	29.56
TraesCS3B01G276000.1	Wheat	cytosol, plastid	27.69	29.56
TraesCS3D01G247300.1	Wheat	cytosol, plastid	27.35	29.2
HORVU3Hr1G067750.8	Barley	cytosol, plastid	27.52	28.96
Bra016536.1-P	Field mustard	nucleus	29.23	25.41
Bra036812.1-P	Field mustard	mitochondrion	6.32	24.03
Bra039715.1-P	Field mustard	nucleus, plastid	14.19	22.43
Bra014304.1-P	Field mustard	cytosol, mitochondrion	10.6	21.38
Bra036898.1-P	Field mustard	cytosol	12.82	20.49
Bra009281.1-P	Field mustard	mitochondrion	12.31	20.34
Bra005929.1-P	Field mustard	plastid	10.94	18.66
Bra023414.1-P	Field mustard	nucleus	12.48	18.48
Bra030407.1-P	Field mustard	cytosol	10.6	18.4
Bra006201.1-P	Field mustard	nucleus	13.16	17.23
Bra001633.1-P	Field mustard	cytosol	10.77	16.89
Bra010055.1-P	Field mustard	plastid	11.62	16.79
Bra021181.1-P	Field mustard	cytosol	11.11	16.71
Bra022163.1-P	Field mustard	cytosol	10.77	16.28
Bra028807.1-P	Field mustard	mitochondrion	9.91	15.26
Bra024161.1-P	Field mustard	mitochondrion	10.09	15.21
Bra009498.1-P	Field mustard	cytosol, mitochondrion	9.74	14.92
Bra020822.1-P	Field mustard	mitochondrion, plastid	10.6	14.76
Bra016490.1-P	Field mustard	nucleus	18.12	14.34
Bra013672.1-P	Field mustard	mitochondrion, nucleus	11.97	14.11
Bra019337.1-P	Field mustard	nucleus	10.77	13.38
Bra025777.1-P	Field mustard	nucleus, plastid	16.24	12.77

Protein Annotations

Gene3D:1.20.5.190	MapMan:35.1	EnsemblPlantsGene:Bra024806	EnsemblPlants:Bra024806.1	EnsemblPlants:Bra024806.1-P	InterPro:DUF4005
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	UniProt:M4E7Q0
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF48	SMART:SM00015
UniParc:UPI000253F876	SEG:seg	:	:	:	:

Description

AT2G02790 (E=2e-211) IQD29 | IQD29 (IQ-domain 29); calmodulin binding

Coordinates

chrA06:-:23543858..23546014

Molecular Weight (calculated)

63927.5 Da

IEP (calculated)

10.352

GRAVY (calculated)

-0.885

Length

585 amino acids

Sequence
(BLAST)

001: MGKTPSPGKW IKSLLGKKSS KSSLEKGSEK LRSAKKEENV VKVVNNVSNL PTNAPPVVSS QEVAATQTAL VPEQQPSRDI EGDEPNANLE SGNDTEELKL
101: EEAATKVQAV VRSHRAREEF QKLKCIIKVQ AVIRGHLVRR QAVATYSCIW GIVKLQALVR GKNARSSETG VQLQKTNTET ESSETLQVTN TCSWLGNPTK
201: LSMIDKILVS SPTALPLKIQ YSPEDPNSAK VWLDRWTQLQ VWAPGPLVVK SLVPKSQTKK RSFQAVEADK GKLKRGIKKP PGGLNTGTSS SSRSTAENEK
301: PKRTVRKPST LGKELNDNKS KQSSRKSTSA IKEGSSLEVK DEKPRTSLKK ASVSNGVDKP ARKSAEKKKK EIVDSVQKEL PGDKVSASVV DDTPEEGEEK
401: VKDSPETVSK EADLDKDENV LVLDKPEKDE LKTAERNDKA EEEIQEPDVL IISSENGNVV SENTKQSDRR TSLPAKIESQ QQEDGLTTQS GRKIPSYMAP
501: TASAKARVRG GQGSPRIGGQ EKPEKNGTTR RHSLPHIANN DKLSAISPRV HRLLIASAKG SINSDRSFSS SKDIGDKSTK AEWKR

Best Arabidopsis Sequence Match ( AT2G02790.3 )
(BLAST)

001: MGKTPSPGKW IKSLLGKKSS KSSLEKGGEK LRSAKKEELV VKVKDNNVSK LPTEPPVVSS QEVAATQTVV VPDVVIAEKQ LSGDIEGDES SNVNLESGND
101: SEEVKLEEAA TKVQAALRAQ QAREESQNLK GITRVQAVIR GHLVRRQAVA TYSCIWGIVK VQALVRGKKA RSSETVAQLQ KTNTETETSE TLQGSTYSWM
201: ENPTKLSMID KLLVSSPTTL PLKIQYSPED PNSAKVWLGR WTQLQVWAPG PLVVKNLVPK SQTKKRSFQA VEAEKGKLKR GVRKPTGVST TANSSTSRST
301: ADNEKPKRTV RKASTLGKEL SKIENDKSKQ SSRKSTSAIK EGSSVEVKDE KPRISHKKAS LSNGIGKATR KSAEKKKEIA DAVQKELPIE EVSVSLVDAP
401: EDEKMNLIPV TISKESDLDK DEKSLVLDKP EQDELRTAER DDKAEEELKT AERDDSAEEK IQEPDAQISS ENGNVASENT KPSDRRASLP AKIENHHQDD
501: GLTQSGRKIP SYMAPTASAK ARIRGQGSPR IAQEKPEKNG TTRRHSLPPA ANGKLSTMSP RAHRLLIASA KGSMNSDRSF SSSKDIGDKS TKAEWKR

Arabidopsis Description

IQD29IQ-domain 29 [Source:UniProtKB/TrEMBL;Acc:F4IRA9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.