Factsheet for Bra012855.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90650	Canola	mitochondrion	100.0	100.0
CDY29016	Canola	mitochondrion	99.03	99.03
AT3G51380.1	Thale cress	mitochondrion	89.32	89.32
Bra036812.1-P	Field mustard	mitochondrion	89.32	59.74
PGSC0003DMT400009431	Potato	mitochondrion	63.11	49.62
VIT_00s0684g00020.t01	Wine grape	mitochondrion	62.14	46.72
GSMUA_Achr1P02670_001	Banana	mitochondrion	60.19	43.36
KRH07958	Soybean	mitochondrion	59.22	43.26
GSMUA_Achr11P...	Banana	mitochondrion	58.25	30.15
OQU93295	Sorghum	plastid	52.43	19.08
Zm00001d048352_P001	Maize	mitochondrion	50.49	18.91
Bra014304.1-P	Field mustard	cytosol, mitochondrion	36.89	13.1
TraesCS5A01G502100.1	Wheat	cytosol, plastid	48.54	13.02
Bra009281.1-P	Field mustard	mitochondrion	44.66	12.99
HORVU4Hr1G081190.1	Barley	mitochondrion	47.57	12.6
TraesCS4D01G327500.1	Wheat	mitochondrion	48.54	12.59
Bra005929.1-P	Field mustard	plastid	41.75	12.54
Bra039715.1-P	Field mustard	nucleus, plastid	44.66	12.43
TraesCS4B01G330700.1	Wheat	mitochondrion	47.57	12.37
Bra036898.1-P	Field mustard	cytosol	42.72	12.02
Bra030407.1-P	Field mustard	cytosol	38.84	11.87
Bra021181.1-P	Field mustard	cytosol	41.75	11.05
Bra001633.1-P	Field mustard	cytosol	39.81	10.99
Bra022163.1-P	Field mustard	cytosol	39.81	10.59
Bra010055.1-P	Field mustard	plastid	40.78	10.37
Bra024161.1-P	Field mustard	mitochondrion	38.84	10.31
Bra023414.1-P	Field mustard	nucleus	37.86	9.87
Bra020822.1-P	Field mustard	mitochondrion, plastid	39.81	9.76
Bra019337.1-P	Field mustard	nucleus	43.69	9.55
Bra013672.1-P	Field mustard	mitochondrion, nucleus	44.66	9.27
Bra006201.1-P	Field mustard	nucleus	39.81	9.17
Bra028807.1-P	Field mustard	mitochondrion	33.01	8.95
Bra009498.1-P	Field mustard	cytosol, mitochondrion	30.1	8.12
Bra008163.1-P	Field mustard	cytosol	35.92	7.17
Bra025690.1-P	Field mustard	cytosol, mitochondrion	34.95	6.38
Bra026581.1-P	Field mustard	cytosol	34.95	6.23
Bra024806.1-P	Field mustard	cytosol, plastid	33.01	5.81
Bra019653.1-P	Field mustard	cytosol	33.01	5.41
Bra016536.1-P	Field mustard	nucleus	34.95	5.35
Bra017409.1-P	Field mustard	cytosol, plastid	27.18	4.96
Bra016490.1-P	Field mustard	nucleus	32.04	4.47
Bra025777.1-P	Field mustard	nucleus, plastid	31.07	4.3
Os05t0100008-00	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.5.190	MapMan:35.2	EnsemblPlantsGene:Bra012855	EnsemblPlants:Bra012855.1	EnsemblPlants:Bra012855.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0007339	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	UniProt:M4D8P5	InterPro:P-loop_NTPase
PFAM:PF00612	PIRSF:PIRSF016533	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF86	SMART:SM00015
SUPFAM:SSF52540	InterPro:Sp17	UniParc:UPI00025406DF	SEG:seg	:	:

Description

AT3G51380 (E=4e-029) IQD20 | IQD20 (IQ-domain 20); calmodulin binding

Coordinates

chrA03:-:21906838..21907226

Molecular Weight (calculated)

11790.9 Da

IEP (calculated)

13.230

GRAVY (calculated)

-0.063

Length

103 amino acids

Sequence
(BLAST)

001: MANSKRLFGV VRRNLLRRSP SSITTIRSSI QQTTRENIAA IKIQAFFRGH LARRAFRALK SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRARQI
101: LSH

Best Arabidopsis Sequence Match ( AT3G51380.1 )
(BLAST)

001: MANSKRLFGV VRRKLLRRSQ SRITIIRSSA PETTREEIAA VKIQAFFRGH LARRAFKALK SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRARQL
101: LSH

Arabidopsis Description

IQD20At3g51380 [Source:UniProtKB/TrEMBL;Acc:Q9SD11]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.