Factsheet for Bra009281.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70019	Canola	cytosol, mitochondrion	97.46	97.46
CDX98994	Canola	mitochondrion	97.46	97.46
Bra005929.1-P	Field mustard	plastid	80.51	83.09
AT5G07240.2	Thale cress	plastid	81.36	64.43
Bra010055.1-P	Field mustard	plastid	66.67	58.27
Bra012855.1-P	Field mustard	mitochondrion	12.99	44.66
KRH09113	Soybean	cytosol	53.39	39.62
KRH38565	Soybean	cytosol	53.39	39.21
KRG91452	Soybean	cytosol	50.28	39.04
KRH35361	Soybean	cytosol, mitochondrion	50.85	38.79
GSMUA_Achr8P11920_001	Banana	cytosol	37.85	37.33
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	40.68	33.57
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	41.53	33.56
VIT_16s0100g00620.t01	Wine grape	cytosol	31.07	33.03
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	42.37	32.68
Solyc03g026110.2.1	Tomato	cytosol, mitochondrion	44.35	32.3
Bra014304.1-P	Field mustard	cytosol, mitochondrion	25.99	31.72
EES12687	Sorghum	cytosol, mitochondrion	41.53	31.48
Os04t0569900-01	Rice	cytosol, mitochondrion	41.24	31.47
PGSC0003DMT400037043	Potato	mitochondrion, nucleus	42.09	31.3
Zm00001d002630_P002	Maize	mitochondrion	40.11	31.07
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	40.11	30.87
TraesCS2D01G398300.1	Wheat	cytosol, mitochondrion	40.11	30.74
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	35.88	30.02
Bra036812.1-P	Field mustard	mitochondrion	12.99	29.87
Bra013672.1-P	Field mustard	mitochondrion, nucleus	41.81	29.84
HORVU0Hr1G005320.2	Barley	cytosol	30.51	29.67
Zm00001d026084_P001	Maize	mitochondrion	40.96	29.23
Bra001633.1-P	Field mustard	cytosol	30.51	28.95
Bra022163.1-P	Field mustard	cytosol	31.36	28.68
Bra021181.1-P	Field mustard	cytosol	30.51	27.76
Bra020822.1-P	Field mustard	mitochondrion, plastid	32.77	27.62
Bra030407.1-P	Field mustard	cytosol	26.27	27.6
Bra024161.1-P	Field mustard	mitochondrion	29.1	26.55
Bra019337.1-P	Field mustard	nucleus	35.03	26.33
Bra028807.1-P	Field mustard	mitochondrion	25.71	23.95
Bra039715.1-P	Field mustard	nucleus, plastid	24.86	23.78
Bra036898.1-P	Field mustard	cytosol	23.73	22.95
Bra009498.1-P	Field mustard	cytosol, mitochondrion	24.58	22.77
Bra023414.1-P	Field mustard	nucleus	20.9	18.73
Bra006201.1-P	Field mustard	nucleus	19.77	15.66
Bra008163.1-P	Field mustard	cytosol	22.6	15.5
Bra026581.1-P	Field mustard	cytosol	21.47	13.15
Bra024806.1-P	Field mustard	cytosol, plastid	20.34	12.31
Bra025690.1-P	Field mustard	cytosol, mitochondrion	18.64	11.7
Bra017409.1-P	Field mustard	cytosol, plastid	18.64	11.68
Bra016536.1-P	Field mustard	nucleus	21.19	11.14
Bra016490.1-P	Field mustard	nucleus	20.34	9.74
Bra019653.1-P	Field mustard	cytosol	17.23	9.71
Bra025777.1-P	Field mustard	nucleus, plastid	18.93	9.01

Protein Annotations

EnsemblPlants:Bra009281.1	EnsemblPlants:Bra009281.1-P	EnsemblPlantsGene:Bra009281	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295
PANTHER:PTHR32295:SF11	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015
SUPFAM:SSF52540	UniParc:UPI000254379E	UniProt:M4CYI4	MapMan:35.2	:	:

Description

AT5G07240 (E=2e-049) IQD24 | IQD24 (IQ-domain 24); calmodulin binding

Coordinates

chrA10:-:15961191..15962650

Molecular Weight (calculated)

39859.6 Da

IEP (calculated)

11.111

GRAVY (calculated)

-0.871

Length

354 amino acids

Sequence
(BLAST)

001: MGFFGRLFGS KKKQEKSSLT NNNRRKWSFT TRSSNPATAL SASSSHPSKR RSDEGVLDAN QHAIAVAAAT AAVAEAALAA AHAAAEVVRL TGRGSGRTSS
101: VNQTNRNNRR WSQEYAAAIK IQSAFRGYLA RRALRALKAL VKLQALVKGH IVRKQTADML RRMQTLVRLQ ARARASRSSH VSESLSEAEY IKLIAMDHHH
201: NHRYQMGSSR WNAPLYNEDN DKILEVDTWK PHFPSYHKES PRKRGSLMVP TGMENSPQAR SRPGSSSGGG SRRRTPFTPT RSEYEYYSGY HPNYMANTES
301: YRAKVRSQSA PRQRLREFSS ESGYKRSAQG QYYYYTAAAE RSFDQRSDYG GVYF

Best Arabidopsis Sequence Match ( AT5G07240.1 )
(BLAST)

001: MGFFGRLFGS KKQEKATPNR RRWSFATRSS HPENDSSSHS SKRRGDEDVL NGDKHAIAVA AATAAVAEAA LAAARAAAEV VRLTNGGRNS SVKQISRSNR
101: RWSQEYKAAM KIQSAFRGYL ARRALRALKA LVKLQALVKG HIVRKQTADM LRRMQTLVRL QARARASRSS HVSDSSHPPT LMIPSSPQSF HARCVSEAEY
201: SKVIAMDHHH NNHRSPMGSS RLLDQWRTEE SLWSAPKYNE DDDKILEVDT WKPHFRESPR KRGSLVVPTS VENSPQLRSR TGSSSGGSRR KTPFTPARSE
301: YEYYSGYHPN YMANTESYKA KVRSQSAPRQ RLQDLPSESG YKRSIQGQYY YYTPAAERSF DQRSDNGIAG YRGVSDGLDR NQSDKSKMYT SFFSSNPLFF
401: Q

Arabidopsis Description

IQD24IQ-domain 24 [Source:TAIR;Acc:AT5G07240]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.