Factsheet for Zm00001d026084_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
peroxisome 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d017793_P001
Zm00001d051589_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G62070.1	Zm00001d017793_P001	AT3G27960.1	21798944
AT5G62070.1	Zm00001d051589_P001	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12687	Sorghum	cytosol, mitochondrion	84.07	89.29
Zm00001d002630_P002	Maize	mitochondrion	81.45	88.4
Os04t0569900-01	Rice	cytosol, mitochondrion	75.4	80.6
HORVU0Hr1G005320.2	Barley	cytosol	58.27	79.4
TraesCS2D01G398300.1	Wheat	cytosol, mitochondrion	73.59	79.0
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	73.19	78.91
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	51.81	58.68
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	50.2	58.04
VIT_02s0025g04120.t01	Wine grape	mitochondrion	49.6	49.8
KRH03972	Soybean	cytosol	40.73	45.19
Solyc08g080470.2.1	Tomato	plastid	45.36	45.09
KRH57246	Soybean	cytosol	40.12	44.72
PGSC0003DMT400007855	Potato	cytosol, plastid	44.15	43.8
KRH77498	Soybean	cytosol, mitochondrion	34.68	43.43
Solyc08g007920.1.1	Tomato	cytosol	20.36	43.16
Solyc08g007930.1.1	Tomato	cytosol	19.35	42.29
Bra005929.1-P	Field mustard	plastid	29.23	42.27
CDX78285	Canola	plastid	29.23	42.15
KRG91452	Soybean	cytosol	38.51	41.89
KRH35361	Soybean	cytosol, mitochondrion	38.51	41.16
CDX98994	Canola	mitochondrion	29.23	40.96
Bra009281.1-P	Field mustard	mitochondrion	29.23	40.96
CDX70019	Canola	cytosol, mitochondrion	29.23	40.96
CDY41368	Canola	mitochondrion, plastid	34.27	40.48
KRH09113	Soybean	cytosol	38.91	40.46
CDX98787	Canola	mitochondrion	23.99	40.2
CDX94150	Canola	nucleus	37.3	39.87
CDY41252	Canola	cytosol, mitochondrion	39.11	39.75
CDY53133	Canola	nucleus	38.91	39.71
KRH38565	Soybean	cytosol	38.31	39.42
Bra019337.1-P	Field mustard	nucleus	37.3	39.28
Bra013672.1-P	Field mustard	mitochondrion, nucleus	39.11	39.11
CDY00253	Canola	plastid	31.05	39.09
CDX76341	Canola	mitochondrion, plastid	33.06	39.05
Bra020822.1-P	Field mustard	mitochondrion, plastid	33.06	39.05
CDX86928	Canola	mitochondrion, plastid	30.85	38.83
CDX98786	Canola	nucleus	37.1	38.74
AT5G62070.1	Thale cress	cytosol, plastid	31.25	38.46
AT4G23060.1	Thale cress	mitochondrion, nucleus	37.5	38.43
Bra010055.1-P	Field mustard	plastid	31.05	38.02
CDX81042	Canola	plastid	29.44	37.73
CDY00251	Canola	plastid	31.25	37.71
Solyc03g026110.2.1	Tomato	cytosol, mitochondrion	36.69	37.45
PGSC0003DMT400037043	Potato	mitochondrion, nucleus	35.69	37.18
PGSC0003DMT400014796	Potato	cytosol	26.81	36.94
VIT_16s0100g00620.t01	Wine grape	cytosol	24.8	36.94
Zm00001d048437_P002	Maize	mitochondrion	29.03	36.36
AT5G07240.2	Thale cress	plastid	30.04	33.33
Zm00001d037688_P001	Maize	mitochondrion	29.64	31.82
Zm00001d010366_P001	Maize	cytosol, mitochondrion	29.44	31.13
Zm00001d032932_P001	Maize	mitochondrion	26.81	31.07
Zm00001d033280_P001	Maize	cytosol, mitochondrion	29.23	30.66
Zm00001d010795_P001	Maize	cytosol, mitochondrion	19.96	30.37
Zm00001d039510_P001	Maize	cytosol, mitochondrion	29.44	30.35
Zm00001d008819_P001	Maize	mitochondrion	27.42	29.18
Zm00001d029197_P001	Maize	nucleus	27.02	28.15
Zm00001d041437_P001	Maize	cytosol, mitochondrion	24.6	27.54
Zm00001d038793_P001	Maize	cytosol	20.16	26.32
Zm00001d012767_P001	Maize	cytosol, mitochondrion	17.14	25.99
Zm00001d043510_P001	Maize	mitochondrion, nucleus	20.77	25.12
Zm00001d015969_P001	Maize	cytosol, mitochondrion, plastid	23.59	23.26
Zm00001d048352_P001	Maize	mitochondrion	12.5	22.55
Zm00001d011138_P003	Maize	cytosol, plastid	23.59	19.8
Zm00001d038838_P001	Maize	mitochondrion	21.98	18.99
Zm00001d043655_P002	Maize	mitochondrion	19.76	17.04
Zm00001d026535_P003	Maize	nucleus	19.15	10.54
Zm00001d001953_P003	Maize	nucleus	18.95	10.25

Protein Annotations

EnsemblPlants:Zm00001d026084_P001	EnsemblPlants:Zm00001d026084_T001	EnsemblPlantsGene:Zm00001d026084	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF52	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	ProteinID:AQK45447.1	SEG:seg	SMART:SM00015	UniParc:UPI000843F58A
UniProt:A0A1D6JC42	MapMan:35.2	:	:	:	:

Description

IQ-domain 23

Coordinates

chr10:+:138077230..138079896

Molecular Weight (calculated)

53273.7 Da

IEP (calculated)

11.274

GRAVY (calculated)

-0.693

Length

496 amino acids

Sequence
(BLAST)

001: MGWAPRWLRG LLGGGGRKAA DTRPVKEKKR WGFGKSFREK PPAPVPARPP TPTPPSHPAA TPRRGYAAAD EAGDEQSKRA IAVAAATAAV AEAAVAAAQA
101: AAAVVRLTSS GRCAPPAAAK REQWAAVRIQ AAFRGYLARR ALKALRGLVK LQALVRGNIV RRQAAETLRC MHALVRVQAR ARACRAIRSQ HVTAHPDPPT
201: PEKYEQAGAP RHGRSGSLKA SASLSPCVLQ GFFVHRDGGD DGCGVVRSVQ ANSSRTPGGE RLGRERSESC GRNWLDRWVE ERYMDDEKNA KILEVDNGKP
301: RRRYASKRRG GGGGNHHHHH QSPCSTTMGS EQNSRSYATM AESPSKDSTT AQQSVPSPAS VGMAEEALSP LRVPVPADVA ELCDSPQFFS ATSSRPGSSR
401: RGPFTPTAKS ECSRSLFGGY SDYPNYMANT ESFRAKARSQ SAPKQRPQYE RSSSLRRASA AQRSAAAAAS SLHAKFTNKA YPGSGRLDRL GLPARY

Best Arabidopsis Sequence Match ( AT4G23060.1 )
(BLAST)

001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY

Arabidopsis Description

IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.