Factsheet for Zm00001d015969_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30090	Sorghum	mitochondrion	52.29	85.39
KXG30089	Sorghum	cytosol, mitochondrion, plastid	28.03	62.67
Os02t0299200-01	Rice	cytosol, mitochondrion, nucleus	58.05	60.21
Zm00001d048437_P002	Maize	mitochondrion	22.66	28.79
Zm00001d002630_P002	Maize	mitochondrion	22.86	25.16
Zm00001d029197_P001	Maize	nucleus	23.06	24.37
Zm00001d026084_P001	Maize	mitochondrion	23.26	23.59
Zm00001d032932_P001	Maize	mitochondrion	19.88	23.36
Zm00001d033280_P001	Maize	cytosol, mitochondrion	21.47	22.83
Zm00001d010795_P001	Maize	cytosol, mitochondrion	14.51	22.39
Zm00001d008819_P001	Maize	mitochondrion	20.68	22.32
Zm00001d037688_P001	Maize	mitochondrion	20.48	22.29
Zm00001d039510_P001	Maize	cytosol, mitochondrion	20.87	21.83
Zm00001d041437_P001	Maize	cytosol, mitochondrion	19.09	21.67
Zm00001d010366_P001	Maize	cytosol, mitochondrion	20.08	21.54
Zm00001d038793_P001	Maize	cytosol	15.31	20.26
Zm00001d012767_P001	Maize	cytosol, mitochondrion	12.72	19.57
Zm00001d043510_P001	Maize	mitochondrion, nucleus	15.9	19.51
Zm00001d048352_P001	Maize	mitochondrion	10.14	18.55
Zm00001d038838_P001	Maize	mitochondrion	17.1	14.98
Zm00001d011138_P003	Maize	cytosol, plastid	17.3	14.72
Zm00001d043655_P002	Maize	mitochondrion	15.51	13.57
Zm00001d026535_P003	Maize	nucleus	12.33	6.88
Zm00001d001953_P003	Maize	nucleus	11.53	6.32

Protein Annotations

EnsemblPlants:Zm00001d015969_P001	EnsemblPlants:Zm00001d015969_T001	EnsemblPlantsGene:Zm00001d015969	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF29
PFAM:PF00612	PFscan:PS50096	ProteinID:AQK69825.1	SEG:seg	SMART:SM00015	UniParc:UPI000844B60F
UniProt:A0A1D6H4S6	MapMan:35.2	:	:	:	:

Description

IQ-domain 21

Coordinates

chr5:+:134894335..134899512

Molecular Weight (calculated)

53618.3 Da

IEP (calculated)

10.273

GRAVY (calculated)

-0.646

Length

503 amino acids

Sequence
(BLAST)

001: MGKKHAAGGG WFAAVRKVFR PSGSGGSSAT TTTSSSSSKD KDKDAVQHGK QATAAAAAEE PEVLLLEHFP ASETSAEASN EGGDAEAELA AVAATTKGRR
101: RRDDEVGDED GEMEEELADD MERARALAAA AEAAVAAAEA AARVVRLAAL RRLSREERAA VRIQAYYRGY LARRALRALR GLVRLQALVR GHQVRRQVHL
201: TMRCMQALVR AQARVRARRL TQHPLLLLPP PTPPASSPTL LLGAGRPLCV ELALQGDHDV GDDGEVADLL LQQRSRSRGR FGRGDDNGGA RSPSGAWDSS
301: SRTLEDARAE GARRHDAAAR RERALAYAYA YQQRQWQRQE DEKAGLGFHW LERWMAATTQ AQQQEHAPDH AKTHQSTPTR TTSSYVTAAA AFANGMSEKT
401: VETETTSRSP LNQASAAAHG RPPAIPGYMA ATRSARAKAR PAPPSATPTH ARSRSGGGLA GDTSSSGQNG SAVAGYSPDS SCTGDWTPPR LGVSTRTSRV
501: AYT

Best Arabidopsis Sequence Match ( AT3G49260.1 )
(BLAST)

001: MGKKGSGGWF STVKKKVFKS SPKDSKRENN IGSNNADIWQ QQHDTQEVVS FEHFPAESSP EISHDVESTA STPATNVGDR KHAMAVAIAT AAAAEAAVAA
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKGF ANLKTEREKP KKLHEVNRTS LYQTQGKEKE RSEGMMKRER ALAYAYTYQR QMQHTNSEEG IGLSSNGPDR NQWAWNWLDH WMSSQPYTGR
301: QTGPGPGPGQ YNPPPYPPFP TAAATTTSDD VSEKTVEMDV TTPTSLKGNI IGLIDREYID LGSYRQGHKQ RKSPTHIPSY MAPTASAKAK VRDQGPTVKL
401: QGTSFMPYWN SSTKNGSVNG SGCDSSSSGG AITTGYPGPR SPNPKSDIRR KPVSPSQSPT GFGKRGWRHD H

Arabidopsis Description

iqd21IQ-domain 21 [Source:UniProtKB/TrEMBL;Acc:F4IWT1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.