Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU79535 | Sorghum | cytosol, mitochondrion | 75.39 | 72.14 |
| TraesCSU01G074100.1 | Wheat | cytosol, mitochondrion | 45.6 | 50.75 |
| TraesCS5A01G055100.1 | Wheat | cytosol, mitochondrion | 44.24 | 48.76 |
| Os12t0604500-00 | Rice | cytosol | 48.53 | 48.21 |
| Zm00001d032932_P001 | Maize | mitochondrion | 38.83 | 40.19 |
| GSMUA_Achr3P14930_001 | Banana | cytosol | 33.86 | 39.58 |
| Zm00001d048437_P002 | Maize | mitochondrion | 34.76 | 38.89 |
| GSMUA_Achr8P26800_001 | Banana | cytosol | 32.51 | 38.5 |
| Zm00001d033280_P001 | Maize | cytosol, mitochondrion | 41.08 | 38.48 |
| CDY29768 | Canola | cytosol | 13.09 | 34.73 |
| KRH69109 | Soybean | nucleus | 32.28 | 34.29 |
| CDY50677 | Canola | nucleus | 28.44 | 34.24 |
| Bra039715.1-P | Field mustard | nucleus, plastid | 28.22 | 33.78 |
| CDY36861 | Canola | nucleus | 28.22 | 33.42 |
| VIT_05s0020g03980.t01 | Wine grape | cytosol | 34.99 | 33.41 |
| KRH31669 | Soybean | cytosol, mitochondrion | 31.83 | 33.33 |
| KRH35475 | Soybean | cytosol | 35.21 | 33.26 |
| KRG91354 | Soybean | cytosol, plastid | 33.86 | 32.05 |
| Bra036898.1-P | Field mustard | cytosol | 25.06 | 30.33 |
| CDY64325 | Canola | cytosol | 25.06 | 29.76 |
| AT4G14750.3 | Thale cress | cytosol | 27.31 | 26.3 |
| Zm00001d002630_P002 | Maize | mitochondrion | 26.86 | 26.04 |
| VIT_14s0030g01880.t01 | Wine grape | nucleus | 22.8 | 25.83 |
| Zm00001d010795_P001 | Maize | cytosol, mitochondrion | 18.51 | 25.15 |
| KRH68719 | Soybean | cytosol | 21.22 | 25.13 |
| Zm00001d026084_P001 | Maize | mitochondrion | 27.54 | 24.6 |
| Zm00001d008819_P001 | Maize | mitochondrion | 25.73 | 24.46 |
| KRG96957 | Soybean | cytosol | 20.09 | 24.05 |
| Zm00001d039510_P001 | Maize | cytosol, mitochondrion | 25.96 | 23.91 |
| Zm00001d010366_P001 | Maize | cytosol, mitochondrion | 25.28 | 23.88 |
| Zm00001d037688_P001 | Maize | mitochondrion | 24.83 | 23.81 |
| Zm00001d012767_P001 | Maize | cytosol, mitochondrion | 17.16 | 23.24 |
| Zm00001d038793_P001 | Maize | cytosol | 19.86 | 23.16 |
| Zm00001d043510_P001 | Maize | mitochondrion, nucleus | 19.64 | 21.22 |
| Zm00001d029197_P001 | Maize | nucleus | 21.67 | 20.17 |
| Zm00001d015969_P001 | Maize | cytosol, mitochondrion, plastid | 21.67 | 19.09 |
| Zm00001d048352_P001 | Maize | mitochondrion | 10.84 | 17.45 |
| Zm00001d011138_P003 | Maize | cytosol, plastid | 18.51 | 13.87 |
| Zm00001d038838_P001 | Maize | mitochondrion | 17.61 | 13.59 |
| Zm00001d043655_P002 | Maize | mitochondrion | 17.16 | 13.22 |
| Zm00001d001953_P003 | Maize | nucleus | 17.16 | 8.29 |
| Zm00001d026535_P003 | Maize | nucleus | 16.7 | 8.21 |
Protein Annotations
| EnsemblPlants:Zm00001d041437_P001 | EnsemblPlants:Zm00001d041437_T001 | EnsemblPlantsGene:Zm00001d041437 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF37 |
| PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | ProteinID:ONM33002.1 | SEG:seg | UniParc:UPI0004DEAB09 |
| UniProt:A0A1D6MW21 | MapMan:35.2 | : | : | : | : |
Description
IQ-domain 19
Coordinates
chr3:+:119533726..119535274
Molecular Weight (calculated)
46926.4 Da
IEP (calculated)
11.982
GRAVY (calculated)
-0.652
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKASQWLRN LLLSGRKGRK AKDRAEADCQ SVLSAPLPSH AQAAATPHGR EKRRWSFRRP GAAASSSQGP LASSSSHCFS EAELHVVVVQ QEQGQQQAAA
101: AAVPEAASTS GTVVALPASG RRTRRRNARG GGRGGEAAAA AVKIQSAFRS YLARKALCAL RGMVMLQAIV RGQLVRRQAS LTLRRMQALV YAQRRARAER
201: LRLLDVVEDD ASRQQAASAT PPRRRSPSPQ HPRSWKPLEA VERRLEENVR TVEVDDGAPR AGARRNSCGH CSASTTPSRT PMPKAEPRQK VSPSPSPSAL
301: TDGSARTPSG RLDDASFTST SEPMPSLRAA PPSYMANTES SRAKARSQSA PRQRLSSAPE TAPAATAVLS PSCCDRPPSQ GGGSARRRAS LDPLDLPGGA
401: PSRRMERCAS RARATTMSSV PGSECGSSST VGHRGSAHGP WLG
101: AAVPEAASTS GTVVALPASG RRTRRRNARG GGRGGEAAAA AVKIQSAFRS YLARKALCAL RGMVMLQAIV RGQLVRRQAS LTLRRMQALV YAQRRARAER
201: LRLLDVVEDD ASRQQAASAT PPRRRSPSPQ HPRSWKPLEA VERRLEENVR TVEVDDGAPR AGARRNSCGH CSASTTPSRT PMPKAEPRQK VSPSPSPSAL
301: TDGSARTPSG RLDDASFTST SEPMPSLRAA PPSYMANTES SRAKARSQSA PRQRLSSAPE TAPAATAVLS PSCCDRPPSQ GGGSARRRAS LDPLDLPGGA
401: PSRRMERCAS RARATTMSSV PGSECGSSST VGHRGSAHGP WLG
001: MGKTSKWFRS LLTGKKERTK EHIIQSECVF TSSIPGTPKE KRRWSFRRSS ATGPPPPACA ITLKDSPPPP PPPPPPPPLQ QPFVVEIVDN EDEQIKNVSA
101: EEIEEFAAIK IQACYRSHLA RKALRALKGL VKLQALVRGH LVRKQATATL RCMQALITLQ AKAREQRIRM IGGDSTNPRT SIHKTRINNF YHENEENIKI
201: VEMDIQSKMY SPAPSALTEM SPRAYSSHFE DCNSFNTAQS SPQCFSRFKE YYNGDTLSSY DYPLFPNYMA NTQSSKAKAR SQSAPKQRPP EIYEKQMSGR
301: RRSSMEAPRN NGVPRAVRMQ RSSSQLGSNT AKESQQHHHH QYYPWMAIKL DRSNISLMES ECGSTSTVMT NTNYGRHVDV QGNNNMY
101: EEIEEFAAIK IQACYRSHLA RKALRALKGL VKLQALVRGH LVRKQATATL RCMQALITLQ AKAREQRIRM IGGDSTNPRT SIHKTRINNF YHENEENIKI
201: VEMDIQSKMY SPAPSALTEM SPRAYSSHFE DCNSFNTAQS SPQCFSRFKE YYNGDTLSSY DYPLFPNYMA NTQSSKAKAR SQSAPKQRPP EIYEKQMSGR
301: RRSSMEAPRN NGVPRAVRMQ RSSSQLGSNT AKESQQHHHH QYYPWMAIKL DRSNISLMES ECGSTSTVMT NTNYGRHVDV QGNNNMY
Arabidopsis Description
IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.