CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96957	Soybean	cytosol	89.04	90.0
CDY29768	Canola	cytosol	17.11	38.32
VIT_14s0030g01880.t01	Wine grape	nucleus	36.1	34.53
KRH07958	Soybean	mitochondrion	11.23	29.79
GSMUA_Achr8P26800_001	Banana	cytosol	29.68	29.68
CDY50677	Canola	nucleus	29.14	29.62
Bra039715.1-P	Field mustard	nucleus, plastid	29.14	29.46
CDY36861	Canola	nucleus	28.88	28.88
Bra036898.1-P	Field mustard	cytosol	27.81	28.42
GSMUA_Achr3P14930_001	Banana	cytosol	28.07	27.7
CDY64325	Canola	cytosol	27.27	27.35
KRH69109	Soybean	nucleus	27.27	24.46
KRH31669	Soybean	cytosol, mitochondrion	27.27	24.11
KRH35475	Soybean	cytosol	29.41	23.45
KRH47199	Soybean	cytosol	24.33	22.98
KRG91354	Soybean	cytosol, plastid	28.34	22.65
TraesCSU01G074100.1	Wheat	cytosol, mitochondrion	24.06	22.61
AT4G14750.3	Thale cress	cytosol	27.81	22.61
Zm00001d033280_P001	Maize	cytosol, mitochondrion	28.34	22.41
Os03t0636700-00	Rice	mitochondrion	26.74	22.37
TraesCS5A01G377500.1	Wheat	cytosol	27.54	22.29
KRH77498	Soybean	cytosol, mitochondrion	23.53	22.22
KRH44268	Soybean	cytosol	23.8	22.14
KRH23382	Soybean	cytosol	22.46	22.11
TraesCS5B01G381100.1	Wheat	cytosol, mitochondrion	27.27	22.08
TraesCS5D01G387500.1	Wheat	cytosol	27.27	22.03
KRH09951	Soybean	cytosol	22.19	21.96
HORVU5Hr1G093430.4	Barley	cytosol	27.27	21.79
TraesCS5A01G055100.1	Wheat	cytosol, mitochondrion	23.26	21.64
EER93770	Sorghum	cytosol, mitochondrion	28.07	21.43
Os12t0604500-00	Rice	cytosol	25.4	21.3
Zm00001d041437_P001	Maize	cytosol, mitochondrion	25.13	21.22
KRH03972	Soybean	cytosol	25.13	21.03
KRH57246	Soybean	cytosol	24.33	20.45
KRH48993	Soybean	plastid	5.08	20.21
KRG91452	Soybean	cytosol	23.53	19.3
OQU79535	Sorghum	cytosol, mitochondrion	23.8	19.22
KRH35361	Soybean	cytosol, mitochondrion	23.53	18.97
KRH09113	Soybean	cytosol	24.06	18.87
KRH38565	Soybean	cytosol	24.06	18.67
KRH74242	Soybean	cytosol, mitochondrion	20.59	18.33
KRH60203	Soybean	cytosol, mitochondrion	17.11	17.78
KRH48992	Soybean	endoplasmic reticulum	15.78	17.46
KRH41488	Soybean	cytosol, mitochondrion	19.52	16.74
KRH33197	Soybean	cytosol, mitochondrion	16.58	15.9
KRH23930	Soybean	nucleus	18.98	15.43
KRH39865	Soybean	nucleus	18.98	15.14
KRH63082	Soybean	cytosol	17.65	14.67
KRH29958	Soybean	cytosol, mitochondrion	17.91	14.66
KRH54515	Soybean	cytosol	22.46	14.38
KRH56937	Soybean	cytosol	22.19	14.16
KRH03447	Soybean	nucleus	22.19	14.12
KRH63392	Soybean	cytosol	21.93	14.07
KRH45861	Soybean	plastid	18.18	12.43
KRG99144	Soybean	cytosol, plastid	17.11	11.7
KRH74806	Soybean	cytosol, plastid	17.38	11.55
KRH69321	Soybean	cytosol, mitochondrion	16.58	11.01
KRH51729	Soybean	cytosol	20.05	8.83
KRH61064	Soybean	nucleus	9.89	5.09

Protein Annotations

Gene3D:1.20.5.190	EntrezGene:100527816	MapMan:35.2	EMBL:ACUP02002123	InterPro:DUF4005	EnsemblPlantsGene:GLYMA_03G246200
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1JRM1	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS
EnsemblPlants:KRH68719	ProteinID:KRH68719	ProteinID:KRH68719.1	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF13178
PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF49	SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI00023377C2
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:44329274..44331308

Molecular Weight (calculated)

42387.6 Da

IEP (calculated)

11.129

GRAVY (calculated)

-0.842

Length

374 amino acids

Sequence
(BLAST)

001: MGKASKWIRN FLLGKKEDKI KKIDAFCSED KSGNTGSLIV SPKVKRRWSF GKLTGAGHKF SRSFDSADSA KLQIQALLET KTPRRLPKPL AKPSKDKNKA
101: ATKIQASFRS YLARRALHAL RGLVKLQALV RGHLVRKQTT ATLRGMHALM AIQVRARIHR VQMAEEANLL RQQSPPQHRQ VPYSTDLITE ENKDSNHMSV
201: EEMLEVLKSR SGPLDGSYVK GRERDSMTYY SKHVPVVSKR ENQYKKTLII EPNSLENYRS MSEFNPTTIA LSTSQRHSVP HGQSLSPNYM NKTESSRAKA
301: RSQSEPRQRP IRGTRHKGKS VESPLNGPRQ NLFSNSLRFD HGSMDHWVIN FHGSTNDSRR NSFGSSSVTT DSYY

Best Arabidopsis Sequence Match ( AT4G14750.1 )
(BLAST)

001: MGKTSKWFRS LLTGKKERTK EHIIQSECVF TSSIPGTPKE KRRWSFRRSS ATGPPPPACA ITLKDSPPPP PPPPPPPPLQ QPFVVEIVDN EDEQIKNVSA
101: EEIEEFAAIK IQACYRSHLA RKALRALKGL VKLQALVRGH LVRKQATATL RCMQALITLQ AKAREQRIRM IGGDSTNPRT SIHKTRINNF YHENEENIKI
201: VEMDIQSKMY SPAPSALTEM SPRAYSSHFE DCNSFNTAQS SPQCFSRFKE YYNGDTLSSY DYPLFPNYMA NTQSSKAKAR SQSAPKQRPP EIYEKQMSGR
301: RRSSMEAPRN NGVPRAVRMQ RSSSQLGSNT AKESQQHHHH QYYPWMAIKL DRSNISLMES ECGSTSTVMT NTNYGRHVDV QGNNNMY

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.