CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39865	Soybean	nucleus	95.22	93.39
KRH29958	Soybean	cytosol, mitochondrion	71.52	71.99
KRH63082	Soybean	cytosol	70.22	71.78
VIT_13s0019g01830.t01	Wine grape	mitochondrion, nucleus	59.35	58.21
AT5G13460.1	Thale cress	nucleus	45.43	47.18
Bra023414.1-P	Field mustard	nucleus	40.22	46.84
CDX85648	Canola	nucleus	40.22	46.84
Solyc01g088250.2.1	Tomato	cytosol, plastid	45.87	46.07
CDX78523	Canola	nucleus	44.57	45.96
Bra006201.1-P	Field mustard	nucleus	44.57	45.86
CDX70505	Canola	nucleus	44.13	45.52
PGSC0003DMT400017589	Potato	cytosol, plastid	40.22	43.02
CDX91120	Canola	nucleus	35.0	42.93
KRH33197	Soybean	cytosol, mitochondrion	32.83	38.72
KRH48993	Soybean	plastid	6.96	34.04
GSMUA_Achr3P17450_001	Banana	nucleus	30.0	30.73
KRH47199	Soybean	cytosol	25.65	29.8
TraesCS5A01G163000.1	Wheat	nucleus	30.43	29.41
KRH44268	Soybean	cytosol	25.65	29.35
TraesCS5B01G160400.1	Wheat	cytosol	30.22	29.2
TraesCS5D01G168000.2	Wheat	nucleus	30.43	29.17
KRH41488	Soybean	cytosol, mitochondrion	26.09	27.52
KRH60203	Soybean	cytosol, mitochondrion	21.52	27.5
Os03t0355700-00	Rice	cytosol	26.96	27.49
KRH74242	Soybean	cytosol, mitochondrion	24.78	27.14
KRH03972	Soybean	cytosol	25.87	26.62
KRG91354	Soybean	cytosol, plastid	26.96	26.5
KRH35475	Soybean	cytosol	26.96	26.44
Zm00001d029197_P001	Maize	nucleus	27.17	26.26
EER94844	Sorghum	cytosol	28.48	26.25
KRH07958	Soybean	mitochondrion	8.04	26.24
KRH48992	Soybean	endoplasmic reticulum	19.13	26.04
KRH57246	Soybean	cytosol	24.78	25.62
KRH09113	Soybean	cytosol	25.22	24.32
KRH35361	Soybean	cytosol, mitochondrion	24.13	23.92
KRH38565	Soybean	cytosol	25.0	23.86
KRG91452	Soybean	cytosol	23.48	23.68
HORVU5Hr1G050840.5	Barley	cytosol, plastid	28.48	23.56
KRH09951	Soybean	cytosol	19.35	23.55
KRH69109	Soybean	nucleus	21.3	23.5
KRH77498	Soybean	cytosol, mitochondrion	20.22	23.48
KRH23382	Soybean	cytosol	19.35	23.42
KRH31669	Soybean	cytosol, mitochondrion	21.52	23.4
KRG96957	Soybean	cytosol	15.65	19.46
KRH68719	Soybean	cytosol	15.43	18.98
KRH63392	Soybean	cytosol	21.52	16.98
KRH54515	Soybean	cytosol	21.52	16.95
KRH56937	Soybean	cytosol	20.65	16.21
KRH45861	Soybean	plastid	18.7	15.72
KRH03447	Soybean	nucleus	20.0	15.65
KRG99144	Soybean	cytosol, plastid	18.48	15.54
KRH74806	Soybean	cytosol, plastid	17.61	14.39
KRH69321	Soybean	cytosol, mitochondrion	16.96	13.85
KRH51729	Soybean	cytosol	21.52	11.66
KRH61064	Soybean	nucleus	11.74	7.43

Protein Annotations

Gene3D:1.20.5.190	EntrezGene:100813620	MapMan:35.1	EMBL:ACUP02007163	InterPro:DUF4005	EnsemblPlantsGene:GLYMA_12G011600
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1LP01	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS
EnsemblPlants:KRH23930	ProteinID:KRH23930	ProteinID:KRH23930.1	ProteinID:KRH23931.1	InterPro:P-loop_NTPase	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF35	SMART:SM00015	SUPFAM:SSF52540
UniParc:UPI000233C738	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:847958..850680

Molecular Weight (calculated)

51760.3 Da

IEP (calculated)

10.659

GRAVY (calculated)

-0.786

Length

460 amino acids

Sequence
(BLAST)

001: MAKKKSWFSL VKRLFIWDTH STQDKKEKRR KWIFGRLKSK RLPSIKAPLP SKGTTLSEAE QEQSKHALTV AIASAAAAEA AVTAAHAAAE VVRLTGQRNE
101: NSEESQPVKT RNGAPQSTYQ CQREIKESAA AIKIQTAFRG YLARKALRAL KGIVKLQAII RGRAVRRQAM SSLKCLQSIV SIQSQVCARR LQMVEGRCDY
201: SENEEMQDSK DKIIRMDSNS ERKWDESTVL KEEVDTSCTS KRERTKEYSF NHRRSAESER SKVNGRWRYW LEQWVDTQLS KSKELEDLDS VFSSHSRAGE
301: EYGGRQLKLR SNIQRQNPVE GLDSPILGSR RSFPHRRQCS VGEDHSFLSS PATPAYMAAT ESAKAKARST SSPKIRTGGN VDMNSDSYSP CKKKLSIASS
401: INSEMLSNGR VGKLSVNQQQ RSPSFKGLSV PIKSSRTTIK DLSINSDCSL PNWDRQAFFK

Best Arabidopsis Sequence Match ( AT5G13460.1 )
(BLAST)

001: MAKKKGLFTV LKRIFISEVN SEKKEKRRKW TFWKLRIKKR LPSITAPPEH RTSHESHEEQ KEEIVSDVGE ISQVSCSRQL DSIEESKGST SPETADLVVQ
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR

Arabidopsis Description

IQD11IQ-domain 11 [Source:UniProtKB/TrEMBL;Acc:Q9LYR0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.