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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
 nucleus: 24385303
mitochondrion: 28499913
msms PMID: 24385303 doi
S Komatsu, S Hiraga, MZ Nouri
National Institute of Crop Science, National Agriculture and Food Research Organization, Kannondai 2-1-18, Tsukuba, 305-8518, Japan, skomatsu@affrc.go.jp.
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH56937 Soybean cytosol 92.52 92.83
KRH54515 Soybean cytosol 71.43 71.92
KRH63392 Soybean cytosol 69.9 70.5
VIT_14s0108g00150.t01 Wine grape nucleus 47.28 48.1
VIT_01s0026g01790.t01 Wine grape cytosol 47.11 47.92
GSMUA_AchrUn_... Banana mitochondrion 35.2 40.91
Zm00001d038838_P001 Maize mitochondrion 39.8 40.77
GSMUA_Achr8P26180_001 Banana mitochondrion 36.39 40.76
Os05t0535900-01 Rice cytosol 39.63 40.59
KXG22418 Sorghum cytosol, plastid 39.8 40.41
Zm00001d011138_P003 Maize cytosol, plastid 40.31 40.1
TraesCS1A01G357500.3 Wheat cytosol, mitochondrion, plastid 39.29 39.9
TraesCS1B01G374100.2 Wheat cytosol, mitochondrion 38.95 39.55
TraesCS1D01G361800.3 Wheat cytosol, mitochondrion, plastid 38.78 39.38
HORVU1Hr1G080360.4 Barley mitochondrion 37.93 37.86
KRH74806 Soybean cytosol, plastid 35.54 37.12
KRH69321 Soybean cytosol, mitochondrion 35.37 36.94
KXG33252 Sorghum cytosol 34.69 36.49
Os01t0716200-01 Rice nucleus 35.37 36.24
TraesCS3B01G276000.1 Wheat cytosol, plastid 33.67 36.13
TraesCS3D01G247300.1 Wheat cytosol, plastid 33.67 36.13
TraesCS3A01G244100.1 Wheat cytosol, plastid 32.99 35.4
KRH45861 Soybean plastid 32.48 34.92
KRG99144 Soybean cytosol, plastid 32.14 34.55
HORVU3Hr1G067750.8 Barley cytosol, plastid 32.31 34.17
Zm00001d043655_P002 Maize mitochondrion 33.33 34.09
KRH07958 Soybean mitochondrion 5.95 24.82
KRH48993 Soybean plastid 3.91 24.47
KRH77498 Soybean cytosol, mitochondrion 15.31 22.73
KRH03972 Soybean cytosol 17.18 22.6
KRH57246 Soybean cytosol 16.84 22.25
KRH68719 Soybean cytosol 14.12 22.19
KRH35475 Soybean cytosol 17.35 21.75
KRH47199 Soybean cytosol 14.63 21.72
KRG91354 Soybean cytosol, plastid 17.18 21.58
KRH09951 Soybean cytosol 13.44 20.9
KRH44268 Soybean cytosol 14.29 20.9
KRH31669 Soybean cytosol, mitochondrion 14.97 20.8
KRH23382 Soybean cytosol 13.44 20.79
KRH69109 Soybean nucleus 14.63 20.62
KRH60203 Soybean cytosol, mitochondrion 12.59 20.56
KRG96957 Soybean cytosol 12.93 20.54
KRG91452 Soybean cytosol 15.82 20.39
KRH09113 Soybean cytosol 16.5 20.34
KRH38565 Soybean cytosol 16.67 20.33
KRH23930 Soybean nucleus 15.65 20.0
KRH41488 Soybean cytosol, mitochondrion 14.8 19.95
KRH39865 Soybean nucleus 15.82 19.83
KRH35361 Soybean cytosol, mitochondrion 15.48 19.61
KRH63082 Soybean cytosol 14.97 19.56
KRH74242 Soybean cytosol, mitochondrion 13.95 19.52
KRH29958 Soybean cytosol, mitochondrion 14.97 19.26
KRH48992 Soybean endoplasmic reticulum 10.71 18.64
KRH33197 Soybean cytosol, mitochondrion 11.56 17.44
KRH51729 Soybean cytosol 19.22 13.31
KRH61064 Soybean nucleus 13.1 10.59
Protein Annotations
Gene3D:1.20.5.190EntrezGene:100807118MapMan:35.1EMBL:ACUP02010348InterPro:DUF4005EnsemblPlantsGene:GLYMA_17G098200
GO:GO:0003674GO:GO:0005488GO:GO:0005515UniProt:I1MTR7InterPro:IPR000048InterPro:IQ_motif_EF-hand-BS
EnsemblPlants:KRH03447ProteinID:KRH03447ProteinID:KRH03447.1PFAM:PF00612PFAM:PF13178PFscan:PS50096
PANTHER:PTHR32295PANTHER:PTHR32295:SF14SMART:SM00015UniParc:UPI00023D6380SEG:seg:
Description
hypothetical protein
Coordinates
chr17:+:7732994..7739887
Molecular Weight (calculated)
64995.3 Da
IEP (calculated)
10.162
GRAVY (calculated)
-0.693
Length
588 amino acids
Sequence
(BLAST)
001: MGKSPGKWIK TVLFGKKSSK SNISKGREVK LVNQEEGVVV TSKVLETGLA LEPTSDTIAR HEEDLELENE EAENVIPGNQ EIDTVGSINE DAALDPEKIR
101: LEEAATKAQA AFRGYLARRA FRALKGIIRL QALIRGHLVR RQAVATLCSM YGIVKFQALV RGGIVRHSNV GSEIQEKCNI LNPLDGKLVK PIAISMKITK
201: LSANAFIRKL LTSSTRIMVL QLQYVPGDPN SVLSWLERWS ASHFWKPVPQ PKKIRDTKSH RKHGNISVGD THMSKSKRTN RKLPTASFDS VPVQAHPEFE
301: KPKRNMRKIP SQSSDPPVQE NPQSELEKIK RNLRKVHNPV VENAVPSEVE SETPKDHLEK ATVTSCLAVS EQEVISSNEK IKKEATLIVS SVPDIETTPR
401: LSVSKEVLDS PSSYQVTVES KPLTEITTKD KNIHVSDEVK NEPIDLPEPI CKDENSHLTN GDLSHKEDQI GSENQKPNGK ASIVAKQERA ENGIQNSPAL
501: PSYMAATESA KAKLKAQGSP RFGQDGSEKN NHTRRHSLPS STNCKISSHS PRTLRQVQSG GKGGHRSDRT VSSSRDGNGK VIQAEWRR
Best Arabidopsis Sequence Match ( AT1G74690.1 )
(BLAST)
001: MGKSTKWLKN VLLGKKTSKS SGSKDKERVV SGKEVLVTSK VEESDVVSDL PSFEVAETNT VDRSGGMLET QNVGPEEISD DEIELPEGKS TDSQNVAPVQ
101: DHSLSDAERI QREIAATSVQ AAFRGYLARR AFWALKGIIR LQALIRGHLV RRQAVATLFS VMGIVRLQAF ARGREIRKSD IGVQVYRKCR LQLLQGNKLA
201: NPTDAYLGIK KLTANAFAQK LLASSPKVLP VHAYDTSNPN SNLIWLENWS ASCFWKPVPQ PKKTISRKPQ NRLLVEAESA KPKKSVRKVP ASNFESSSVQ
301: TSFEFEKPKR SFRKVSSQSI EPPAVEDPQI ELEKVKRSLR KVHNPVVESS IQPQRSPRKE VEKPKLGVEK TRESSYPLVH ETAEEPVNVC DEKKKQEISE
401: QPEEEVHALE MEVHTPGPLE TNEALDSSLV NQIDSNEKAM VEEKPSMEKD TKEEKTPKPN NKENSAGKEN QKSRKKGSAT SKTEREESNG HHETSPSIPS
501: YMQATKSAKA KLRLQGSPKS AEQDGTEKAT VPRRHSLPSP GNGRITSHSP RTTRLANSGD KTGNKKEKPL LSSREGNAKT TPAERKR
Arabidopsis Description
IQD31Protein IQ-DOMAIN 31 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4D8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.