CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54515	Soybean	cytosol	88.68	88.53
KRH03447	Soybean	nucleus	70.5	69.9
KRH56937	Soybean	cytosol	70.15	69.8
VIT_14s0108g00150.t01	Wine grape	nucleus	46.48	46.89
VIT_01s0026g01790.t01	Wine grape	cytosol	45.28	45.67
KXG22418	Sorghum	cytosol, plastid	38.94	39.21
Os05t0535900-01	Rice	cytosol	38.42	39.02
Zm00001d038838_P001	Maize	mitochondrion	38.42	39.02
GSMUA_Achr8P26180_001	Banana	mitochondrion	34.82	38.67
Zm00001d011138_P003	Maize	cytosol, plastid	38.59	38.07
GSMUA_AchrUn_...	Banana	mitochondrion	32.93	37.94
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	37.56	37.82
TraesCS1D01G361800.3	Wheat	cytosol, mitochondrion, plastid	36.71	36.96
TraesCS1B01G374100.2	Wheat	cytosol, mitochondrion	36.71	36.96
HORVU1Hr1G080360.4	Barley	mitochondrion	36.36	35.99
Os01t0716200-01	Rice	nucleus	34.82	35.37
TraesCS3B01G276000.1	Wheat	cytosol, plastid	33.1	35.22
TraesCS3D01G247300.1	Wheat	cytosol, plastid	32.93	35.04
KRH74806	Soybean	cytosol, plastid	33.62	34.81
KXG33252	Sorghum	cytosol	33.28	34.7
TraesCS3A01G244100.1	Wheat	cytosol, plastid	32.59	34.67
KRH69321	Soybean	cytosol, mitochondrion	32.08	33.21
HORVU3Hr1G067750.8	Barley	cytosol, plastid	31.56	33.09
KRH45861	Soybean	plastid	31.05	33.09
Zm00001d043655_P002	Maize	mitochondrion	32.08	32.52
KRG99144	Soybean	cytosol, plastid	29.67	31.63
KRH07958	Soybean	mitochondrion	6.69	27.66
KRH48993	Soybean	plastid	4.12	25.53
KRH77498	Soybean	cytosol, mitochondrion	15.95	23.48
KRH03972	Soybean	cytosol	17.84	23.27
KRH57246	Soybean	cytosol	17.5	22.92
KRH47199	Soybean	cytosol	15.44	22.73
KRH23382	Soybean	cytosol	14.75	22.63
KRH44268	Soybean	cytosol	15.44	22.39
KRH69109	Soybean	nucleus	15.95	22.3
KRH09951	Soybean	cytosol	14.41	22.22
KRH35475	Soybean	cytosol	17.67	21.96
KRH68719	Soybean	cytosol	14.07	21.93
KRG96957	Soybean	cytosol	13.72	21.62
KRH23930	Soybean	nucleus	16.98	21.52
KRH31669	Soybean	cytosol, mitochondrion	15.61	21.51
KRG91354	Soybean	cytosol, plastid	17.15	21.37
KRH39865	Soybean	nucleus	17.15	21.32
KRG91452	Soybean	cytosol	16.47	21.05
KRH60203	Soybean	cytosol, mitochondrion	12.86	20.83
KRH09113	Soybean	cytosol	16.98	20.75
KRH38565	Soybean	cytosol	17.15	20.75
KRH35361	Soybean	cytosol, mitochondrion	16.47	20.69
KRH41488	Soybean	cytosol, mitochondrion	15.27	20.41
KRH63082	Soybean	cytosol	15.61	20.22
KRH29958	Soybean	cytosol, mitochondrion	15.78	20.13
KRH74242	Soybean	cytosol, mitochondrion	14.41	20.0
KRH48992	Soybean	endoplasmic reticulum	10.81	18.64
KRH33197	Soybean	cytosol, mitochondrion	11.32	16.92
KRH51729	Soybean	cytosol	20.93	14.37
KRH61064	Soybean	nucleus	14.41	11.55

Protein Annotations

Gene3D:1.20.5.190	EntrezGene:100814860	MapMan:35.1	EMBL:ACUP02002678	InterPro:DUF4005	EnsemblPlantsGene:GLYMA_04G173100
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1JWY1	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS
ProteinID:KRH63391.1	EnsemblPlants:KRH63392	ProteinID:KRH63392	ProteinID:KRH63392.1	PFAM:PF00612	PFAM:PF13178
PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF14	SMART:SM00015	UniParc:UPI000233A67A	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:43294619..43302116

Molecular Weight (calculated)

64576.2 Da

IEP (calculated)

10.048

GRAVY (calculated)

-0.856

Length

583 amino acids

Sequence
(BLAST)

001: MGKSPGKWIK TVLFGKKSSK SNISKGREKF VNKKEAVVSS NELENGLSLD PTPDEIATNE EDHELENEES ENILPDNQER DIIGSVDPDA PPDPEKIRLE
101: QAASKAQAAF RGYLARRAFR ALKGIIRLQA LIRGHLVRKQ AVVTLCCMYG IVKLQALVRG GRIRQSNDFH EKCNLFKPLD AKLGEPVGIS TKISKLTANT
201: FIHKLLASSI TIMALQLQYV NGDPNSVLSW LERWSASYFW KPVPQPKKIR DSKSQRKQGN VSNGEAQITK SKRTTRKLPI ANFETALEQT NPEFEKPKRN
301: FRKTPYQVSD PEQENPQSEL EKVKRSLRKI HNPVVENAGQ PEVESETPKQ HLEMTKVIPG HAVLEQATIT SDDKIKMEET STISNVPDVE ITPIPSVNKE
401: VSEILNNYQV SVESKPLSET PTKDRNTSHD EVKNKLGNLP ETIFKDENSL LTNGDLSHSD LTGNENQKPT RKISNLTKQE NGEDGIKNSP KLPSYMAATE
501: SAKAKLRAQG SPRFGQDGTE KNNTAGGSGR HSLPSSTNNQ ISSHSPKPQR SVPAGGKGGN KSDRTVPSSK AGNGKVTQAE WRR

Best Arabidopsis Sequence Match ( AT1G14380.7 )
(BLAST)

001: MGKTPGKWIK TLLLGKKSPK SNSDNRSQKL KSAKKEELVE SVTEDLSNLT VDPPVVSSQP VPASTAQNVV SPINGDESKD NLESRNDLGE VELEQAAIKV
101: QATFRAHQAR RAFRTLKGII RLQAVIRGHL VRRQAIATYS CIWGIVKFQA LVRGQKARSS DIAIQFQKKH MEASDSEVLQ SSTCSWMDNP TKFVFVDKLL
201: ASSPTALPLK IQYGPEEPNS AKVWLERWTQ LQVWSSGSRV PRIEIPKSQS KKRNYQAVVE AEKKRPKRSI KKPSGTTSGT GPSRFTAERN KPKRNVRKAS
301: TLSKDPLRNE SDKANHNSRK SRSGSKEGSP LEIKDEKPSP SLKRSSLSNG SKKATLRSAE KKKKDIPDSS VQIQPEGKVS ENVLEGGDNI EFGEKEKDKA
401: DAVPIEFDIV KDEKSPVLDR TEEDELKTAE TSDKAEALKC ADVKVSSENG NVGSDNTKQS EKRALLPANI DKQDDGLTLS GRKIPSYMAP TASAKARVKG
501: EASPRFAQAK TEINGALRRH SLPSPANGKL STTTMSPRAQ KLLLASAKGS MNGDKSFTSS KDITHKSTRT DWKR

Arabidopsis Description

IQD28At1g14380 [Source:UniProtKB/TrEMBL;Acc:Q8GZ87]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.