CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41488	Soybean	cytosol, mitochondrion	93.33	77.06
KRH74242	Soybean	cytosol, mitochondrion	73.06	62.62
VIT_11s0016g03030.t01	Wine grape	cytosol	72.78	60.23
KRH48992	Soybean	endoplasmic reticulum	55.0	58.58
Solyc12g008520.1.1	Tomato	cytosol	56.94	50.12
KRH47199	Soybean	cytosol	54.72	49.75
KRH44268	Soybean	cytosol	53.89	48.26
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	47.5	46.34
PGSC0003DMT400000953	Potato	cytosol	46.67	46.15
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	47.78	42.36
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	43.89	41.91
AT4G29150.1	Thale cress	mitochondrion	45.56	41.1
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	46.11	41.09
CDY30233	Canola	mitochondrion	44.17	40.98
GSMUA_AchrUn_...	Banana	cytosol	43.06	40.9
GSMUA_Achr10P...	Banana	cytosol	50.0	40.82
Bra024161.1-P	Field mustard	mitochondrion	43.89	40.72
CDY47784	Canola	mitochondrion	43.89	40.72
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	40.83	39.2
Os01t0190500-01	Rice	cytosol, mitochondrion	50.0	38.71
TraesCS1B01G142100.1	Wheat	cytosol	48.61	38.55
TraesCS1A01G122900.1	Wheat	cytosol, plastid	48.33	38.33
TraesCS1D01G123800.1	Wheat	cytosol	48.33	38.33
Os05t0187500-01	Rice	cytosol	50.0	38.3
TraesCS3B01G127100.1	Wheat	cytosol	49.17	38.23
TraesCS3D01G109900.1	Wheat	cytosol, mitochondrion	48.61	37.96
Zm00001d037688_P001	Maize	mitochondrion	48.06	37.45
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	48.33	37.26
Zm00001d010366_P001	Maize	cytosol, mitochondrion	48.06	36.89
EES02320	Sorghum	mitochondrion	49.17	36.88
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	40.28	36.25
Zm00001d039510_P001	Maize	cytosol, mitochondrion	47.5	35.55
KXG21487	Sorghum	cytosol, mitochondrion	48.61	35.5
Zm00001d008819_P001	Maize	mitochondrion	45.83	35.41
KRH09951	Soybean	cytosol	35.83	34.13
KRH23382	Soybean	cytosol	35.56	33.68
KRH48993	Soybean	plastid	8.61	32.98
HORVU1Hr1G028250.6	Barley	mitochondrion	47.78	32.64
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	48.06	30.19
KRH07958	Soybean	mitochondrion	11.67	29.79
KRH03972	Soybean	cytosol	31.94	25.73
KRG91452	Soybean	cytosol	32.5	25.66
KRH35361	Soybean	cytosol, mitochondrion	32.78	25.43
KRG91354	Soybean	cytosol, plastid	32.5	25.0
KRH57246	Soybean	cytosol	30.56	24.72
KRH09113	Soybean	cytosol	32.22	24.32
KRH38565	Soybean	cytosol	32.22	24.07
KRH77498	Soybean	cytosol, mitochondrion	26.39	23.99
KRH35475	Soybean	cytosol	31.11	23.88
KRH69109	Soybean	nucleus	25.0	21.58
KRH23930	Soybean	nucleus	27.5	21.52
KRH31669	Soybean	cytosol, mitochondrion	25.28	21.51
KRH29958	Soybean	cytosol, mitochondrion	26.67	21.01
KRH39865	Soybean	nucleus	27.22	20.9
KRH33197	Soybean	cytosol, mitochondrion	22.5	20.77
KRH63082	Soybean	cytosol	25.0	20.0
KRH68719	Soybean	cytosol	17.78	17.11
KRG96957	Soybean	cytosol	17.5	17.03
KRH63392	Soybean	cytosol	20.83	12.86
KRH54515	Soybean	cytosol	20.83	12.84
KRG99144	Soybean	cytosol, plastid	19.44	12.8
KRH56937	Soybean	cytosol	20.56	12.63
KRH03447	Soybean	nucleus	20.56	12.59
KRH45861	Soybean	plastid	18.33	12.07
KRH74806	Soybean	cytosol, plastid	16.94	10.83
KRH69321	Soybean	cytosol, mitochondrion	16.67	10.66
KRH51729	Soybean	cytosol	21.11	8.95
KRH61064	Soybean	nucleus	10.0	4.95

Protein Annotations

EMBL:ACUP02003353	EnsemblPlants:KRH60203	EnsemblPlantsGene:GLYMA_05G2261001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF22
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:KRH60203	ProteinID:KRH60203.1	SEG:seg
SMART:SM00015	UniParc:UPI0006EDD181	UniProt:A0A0R0K5R4	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr5:-:40466364..40467810

Molecular Weight (calculated)

39687.9 Da

IEP (calculated)

10.644

GRAVY (calculated)

-0.521

Length

360 amino acids

Sequence
(BLAST)

001: MGRAIRWLKG LFGIRTDRER KENSNHSDRD SRGLCHNPTT IPPNISPAEA AWLQSFYSET EKEQNKHAIA VAAATAAAAD AAVTAAQAAV AVVRLTSHGN
101: GRDTMFGGGG QERLAVVKIQ TFFRGYLARK ALRALKGLVK LQALVRGYLV RKQAAATLHS MQALIRAQAT VRSKKSHGLS STKNEAHLFQ TQARRSMERF
201: DDIKSEYIAP IHSRRLSSSF DATMNNANSV DGSPKIVEVD TGSGRPKSRS RRSNTSMSDF GDDPSFQALP SPLPFAHLSI PSHRNYHDSE WGLTREECRF
301: STAQSTPRFT NSCSCGSVVV APMSMTPKSV CTENFFYGQY HNFPNYMAST QSFKAKLRSH

Best Arabidopsis Sequence Match ( AT4G29150.1 )
(BLAST)

001: MRKNLTKLTR VKRETKMGRA TRWFKGLFGI KPSSCSGTDS GTISNRLDRS LCDSYETIPP NISEKEAAWL RSFYAAGEEE KERRTHAIAV AAATAAAADA
101: AVAAAKAAAA VVRLQGQGKS GPLGGGKSRE HRAAMQIQCA FRGYLARKAL RALRGVVKIQ ALVRGFLVRN QAAATLRSME ALVRAQKTVK IQRALRRNGN
201: AAPARKSTER FSGSLENRNN GEETAKIVEV DTGTRPGTYR IRAPVLSGSD FLDNPFRRTL SSPLSGRVPP RLSMPKPEWE ECSSKFPTAQ STPRFSGGSP
301: ARSVCCSGGG VEAEVDTEAD ANRFCFLSGE FNSGYMADTT SFRAKLRSHS APRQRPESNA SAGGWRRSIG GGGVRMQRQS CSGVREAVVG NIERRRMRW

Arabidopsis Description

IQD25IQ-domain 25 [Source:UniProtKB/TrEMBL;Acc:F4JMV6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.