Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30233 | Canola | mitochondrion | 82.71 | 85.05 |
| Bra024161.1-P | Field mustard | mitochondrion | 81.95 | 84.28 |
| CDY47784 | Canola | mitochondrion | 81.7 | 84.02 |
| VIT_11s0016g03030.t01 | Wine grape | cytosol | 51.13 | 46.9 |
| KRH60203 | Soybean | cytosol, mitochondrion | 41.1 | 45.56 |
| KRH74242 | Soybean | cytosol, mitochondrion | 46.62 | 44.29 |
| KRH41488 | Soybean | cytosol, mitochondrion | 46.62 | 42.66 |
| Solyc12g008520.1.1 | Tomato | cytosol | 43.36 | 42.3 |
| AT3G16490.1 | Thale cress | cytosol | 39.85 | 40.87 |
| KRH48992 | Soybean | endoplasmic reticulum | 33.58 | 39.65 |
| PGSC0003DMT400000953 | Potato | cytosol | 34.84 | 38.19 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 35.09 | 37.94 |
| AT1G51960.1 | Thale cress | cytosol, mitochondrion | 33.33 | 37.89 |
| TraesCS1D01G123800.1 | Wheat | cytosol | 43.11 | 37.89 |
| TraesCS1B01G142100.1 | Wheat | cytosol | 43.11 | 37.89 |
| Os05t0187500-01 | Rice | cytosol | 44.61 | 37.87 |
| TraesCS1A01G122900.1 | Wheat | cytosol, plastid | 42.86 | 37.67 |
| Os01t0190500-01 | Rice | cytosol, mitochondrion | 43.11 | 36.99 |
| GSMUA_Achr6P14870_001 | Banana | cytosol, mitochondrion | 33.83 | 36.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 34.09 | 35.88 |
| GSMUA_Achr10P... | Banana | cytosol | 39.6 | 35.83 |
| GSMUA_Achr5P06520_001 | Banana | cytosol, mitochondrion | 36.34 | 35.71 |
| TraesCS3B01G127100.1 | Wheat | cytosol | 40.85 | 35.21 |
| TraesCS3D01G109900.1 | Wheat | cytosol, mitochondrion | 40.6 | 35.14 |
| TraesCS3A01G108100.1 | Wheat | cytosol, mitochondrion | 41.1 | 35.12 |
| AT3G51380.1 | Thale cress | mitochondrion | 9.02 | 34.95 |
| EES02320 | Sorghum | mitochondrion | 41.85 | 34.79 |
| Zm00001d010366_P001 | Maize | cytosol, mitochondrion | 40.85 | 34.75 |
| GSMUA_Achr3P17570_001 | Banana | cytosol, mitochondrion | 35.09 | 34.65 |
| Zm00001d037688_P001 | Maize | mitochondrion | 39.85 | 34.42 |
| GSMUA_Achr7P13670_001 | Banana | cytosol, mitochondrion | 32.33 | 34.22 |
| Zm00001d039510_P001 | Maize | cytosol, mitochondrion | 40.85 | 33.89 |
| GSMUA_Achr8P20170_001 | Banana | cytosol, mitochondrion | 33.83 | 33.75 |
| KXG21487 | Sorghum | cytosol, mitochondrion | 41.6 | 33.67 |
| HORVU1Hr1G028250.6 | Barley | mitochondrion | 43.36 | 32.83 |
| Zm00001d008819_P001 | Maize | mitochondrion | 38.1 | 32.62 |
| HORVU3Hr1G019630.3 | Barley | endoplasmic reticulum, plastid | 41.1 | 28.62 |
| AT5G62070.1 | Thale cress | cytosol, plastid | 26.32 | 26.05 |
| AT4G23060.1 | Thale cress | mitochondrion, nucleus | 28.32 | 23.35 |
| AT5G07240.2 | Thale cress | plastid | 26.07 | 23.27 |
| AT5G03960.2 | Thale cress | cytosol, mitochondrion | 21.8 | 21.53 |
| AT4G14750.3 | Thale cress | cytosol | 23.56 | 20.43 |
| AT5G13460.1 | Thale cress | nucleus | 19.3 | 17.38 |
| AT1G74690.1 | Thale cress | cytosol | 19.3 | 13.12 |
| AT1G18840.1 | Thale cress | cytosol | 18.8 | 13.11 |
| AT1G14380.1 | Thale cress | cytosol | 16.54 | 9.94 |
| AT2G02790.1 | Thale cress | cytosol | 15.29 | 9.59 |
| AT1G19870.1 | Thale cress | nucleus | 19.05 | 9.57 |
Protein Annotations
| Gene3D:1.20.5.190 | MapMan:35.2 | EntrezGene:829036 | UniProt:A0A178V3F0 | ProteinID:AEE85592.1 | ArrayExpress:AT4G29150 |
| EnsemblPlantsGene:AT4G29150 | RefSeq:AT4G29150 | TAIR:AT4G29150 | RefSeq:AT4G29150-TAIR-G | EnsemblPlants:AT4G29150.1 | TAIR:AT4G29150.1 |
| InterPro:DUF4005 | UniProt:F4JMV6 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| Symbol:IQD25 | InterPro:IQ_motif_EF-hand-BS | RefSeq:NP_194644.2 | ProteinID:OAP00749.1 | InterPro:P-loop_NTPase | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF22 | SMART:SM00015 | SUPFAM:SSF52540 |
| UniParc:UPI000150581C | SEG:seg | : | : | : | : |
Description
IQD25IQ-domain 25 [Source:UniProtKB/TrEMBL;Acc:F4JMV6]
Coordinates
chr4:+:14378706..14380512
Molecular Weight (calculated)
43343.7 Da
IEP (calculated)
11.499
GRAVY (calculated)
-0.554
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKNLTKLTR VKRETKMGRA TRWFKGLFGI KPSSCSGTDS GTISNRLDRS LCDSYETIPP NISEKEAAWL RSFYAAGEEE KERRTHAIAV AAATAAAADA
101: AVAAAKAAAA VVRLQGQGKS GPLGGGKSRE HRAAMQIQCA FRGYLARKAL RALRGVVKIQ ALVRGFLVRN QAAATLRSME ALVRAQKTVK IQRALRRNGN
201: AAPARKSTER FSGSLENRNN GEETAKIVEV DTGTRPGTYR IRAPVLSGSD FLDNPFRRTL SSPLSGRVPP RLSMPKPEWE ECSSKFPTAQ STPRFSGGSP
301: ARSVCCSGGG VEAEVDTEAD ANRFCFLSGE FNSGYMADTT SFRAKLRSHS APRQRPESNA SAGGWRRSIG GGGVRMQRQS CSGVREAVVG NIERRRMRW
101: AVAAAKAAAA VVRLQGQGKS GPLGGGKSRE HRAAMQIQCA FRGYLARKAL RALRGVVKIQ ALVRGFLVRN QAAATLRSME ALVRAQKTVK IQRALRRNGN
201: AAPARKSTER FSGSLENRNN GEETAKIVEV DTGTRPGTYR IRAPVLSGSD FLDNPFRRTL SSPLSGRVPP RLSMPKPEWE ECSSKFPTAQ STPRFSGGSP
301: ARSVCCSGGG VEAEVDTEAD ANRFCFLSGE FNSGYMADTT SFRAKLRSHS APRQRPESNA SAGGWRRSIG GGGVRMQRQS CSGVREAVVG NIERRRMRW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.