Factsheet for TraesCS1B01G142100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G123800.1	Wheat	cytosol	99.12	99.12
TraesCS1A01G122900.1	Wheat	cytosol, plastid	98.9	98.9
HORVU1Hr1G028250.6	Barley	mitochondrion	95.81	82.54
Os05t0187500-01	Rice	cytosol	81.28	78.51
Zm00001d037688_P001	Maize	mitochondrion	73.79	72.51
KXG21487	Sorghum	cytosol, mitochondrion	76.43	70.39
Zm00001d010366_P001	Maize	cytosol, mitochondrion	72.03	69.72
TraesCS3B01G127100.1	Wheat	cytosol	69.16	67.82
KRH48993	Soybean	plastid	12.11	58.51
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	47.36	57.33
GSMUA_Achr10P...	Banana	cytosol	54.19	55.78
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	48.9	54.95
VIT_11s0016g03030.t01	Wine grape	cytosol	51.1	53.33
VIT_09s0002g03360.t01	Wine grape	cytosol, mitochondrion	47.14	53.23
KRH47199	Soybean	cytosol	45.59	52.27
Solyc06g066430.2.1	Tomato	nucleus	44.71	51.79
KRH44268	Soybean	cytosol	45.59	51.49
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	46.04	51.48
GSMUA_AchrUn_...	Banana	cytosol	42.95	51.45
KRH74242	Soybean	cytosol, mitochondrion	47.58	51.43
CDY43103	Canola	cytosol	39.43	48.64
KRH60203	Soybean	cytosol, mitochondrion	38.55	48.61
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	42.51	48.25
Solyc12g008520.1.1	Tomato	cytosol	43.39	48.17
CDY68636	Canola	cytosol	41.19	48.07
KRH41488	Soybean	cytosol, mitochondrion	46.04	47.94
Bra021181.1-P	Field mustard	cytosol	40.97	47.81
CDX75883	Canola	cytosol	39.43	47.73
Bra001633.1-P	Field mustard	cytosol	39.21	47.72
Bra022163.1-P	Field mustard	cytosol	40.53	47.55
CDX92076	Canola	cytosol	40.53	47.55
CDX82400	Canola	cytosol	38.99	47.45
AT3G16490.1	Thale cress	cytosol	40.53	47.3
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	39.21	47.21
CDY67178	Canola	cytosol, mitochondrion	39.87	46.65
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	37.44	46.07
PGSC0003DMT400042595	Potato	nucleus	14.76	44.08
PGSC0003DMT400000953	Potato	cytosol	35.24	43.96
KRH48992	Soybean	endoplasmic reticulum	32.6	43.79
AT4G29150.1	Thale cress	mitochondrion	37.89	43.11
CDY46537	Canola	cytosol, mitochondrion	27.53	43.1
Bra014304.1-P	Field mustard	cytosol, mitochondrion	27.53	43.1
CDY30233	Canola	mitochondrion	36.56	42.78
CDY53440	Canola	mitochondrion	27.31	42.76
Bra024161.1-P	Field mustard	mitochondrion	36.34	42.53
AT1G51960.1	Thale cress	cytosol, mitochondrion	32.82	42.45
CDY47784	Canola	mitochondrion	35.68	41.75
CDY45643	Canola	cytosol	28.63	39.88
Bra030407.1-P	Field mustard	cytosol	28.85	38.87
KRH23382	Soybean	cytosol	30.62	36.58
KRH09951	Soybean	cytosol	30.18	36.24
TraesCS1B01G354600.1	Wheat	cytosol, mitochondrion	24.67	33.04
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	32.38	31.96
TraesCS2B01G492900.1	Wheat	cytosol, mitochondrion	28.19	29.36
TraesCS3B01G309600.1	Wheat	mitochondrion	24.23	29.18
TraesCS4B01G277100.2	Wheat	cytosol, mitochondrion	29.96	28.22
TraesCS5B01G381100.1	Wheat	cytosol, mitochondrion	28.41	27.92
TraesCS5B01G160400.1	Wheat	cytosol	27.09	25.84
TraesCS7B01G244900.1	Wheat	cytosol	20.93	21.44
TraesCS3B01G276000.1	Wheat	cytosol, plastid	17.84	14.78
TraesCS1B01G374100.2	Wheat	cytosol, mitochondrion	18.5	14.51
TraesCS4B01G330700.1	Wheat	mitochondrion	11.01	12.63
TraesCS2B01G520500.3	Wheat	nucleus	20.7	10.97

Protein Annotations

EnsemblPlants:TraesCS1B01G142100.1	EnsemblPlantsGene:TraesCS1B01G142100	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF27	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	MapMan:35.2	:

Description

No Description!

Coordinates

chr1B:+:190630367..190632102

Molecular Weight (calculated)

48846.0 Da

IEP (calculated)

11.128

GRAVY (calculated)

-0.485

Length

454 amino acids

Sequence
(BLAST)

001: MGKAARWIRG FLGGGGKKEQ SKDQKPIPPP TNAKRWSFGK SSRDSAEAAA TAAATSARGG NAAIARAAEA AWLRSVYDET EREQSKHAIA VAAATQAAAD
101: AAVAAAHAAV AVVRLTNKGR AAHAGEHRGP AAAAVRIQTA FRGFLAKKAL RALKALVKLQ ALVRGYLVRK QAAATLQSMQ ALVRAQASMR AHRAVASAAL
201: PQLHHSSFRP RRSLQERYAD DTRSEHGVAA YSRRLSASIE SSSYGYDRSP KIVEMDTGRP KSRSSSRRAS SPLLDPCEEW CAATNPMSSP LLLPCHMPGG
301: APPRIAVPTP RHLPEYDWCA MEKARPATAQ CTPRYMNANA PATPTKSVCG SGYSSSSLLN CPSYMSSTQS FEAKVRSHSA PKQRPEPPTN RKRVPLSEVV
401: VVESRASLSG VGMQRSCNRV EEAFNFKTAV VGRLDRPSTG SVENDRQAFL QRRW

Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Arabidopsis Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.