Factsheet for TraesCS3B01G276000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G247300.1	Wheat	cytosol, plastid	96.17	96.17
TraesCS3A01G244100.1	Wheat	cytosol, plastid	95.07	95.07
HORVU3Hr1G067750.8	Barley	cytosol, plastid	86.86	85.61
Os01t0716200-01	Rice	nucleus	68.61	65.51
KXG33252	Sorghum	cytosol	61.31	60.11
Zm00001d043655_P002	Maize	mitochondrion	60.4	57.57
TraesCS1B01G374100.2	Wheat	cytosol, mitochondrion	55.66	52.68
GSMUA_Achr4P30750_001	Banana	mitochondrion	18.8	38.43
GSMUA_Achr2P15790_001	Banana	cytosol	37.77	36.13
VIT_01s0026g01790.t01	Wine grape	cytosol	37.59	35.64
GSMUA_Achr4P30780_001	Banana	cytosol, mitochondrion	35.22	34.84
VIT_14s0108g00150.t01	Wine grape	nucleus	36.5	34.6
KRH56937	Soybean	cytosol	36.68	34.3
KRH03447	Soybean	nucleus	36.13	33.67
KRH54515	Soybean	cytosol	35.4	33.22
KRH63392	Soybean	cytosol	35.22	33.1
VIT_17s0000g05840.t01	Wine grape	endoplasmic reticulum, extracellular	37.23	32.74
Solyc05g007130.2.1	Tomato	cytosol, plastid	30.47	30.31
PGSC0003DMT400045444	Potato	cytosol, plastid	30.66	30.22
KRG99144	Soybean	cytosol, plastid	29.56	29.62
Bra026581.1-P	Field mustard	cytosol	30.84	29.24
CDY41676	Canola	cytosol, plastid	30.66	29.22
KRH45861	Soybean	plastid	29.01	29.07
CDY67405	Canola	cytosol	30.66	29.02
CDY04137	Canola	cytosol, plastid	29.38	28.6
CDY04138	Canola	cytosol, plastid	29.2	28.52
CDY45197	Canola	nucleus, plastid	30.11	28.3
CDY03037	Canola	cytosol	29.74	28.2
KRH69321	Soybean	cytosol, mitochondrion	28.83	28.06
Bra017409.1-P	Field mustard	cytosol, plastid	28.83	27.96
KRH74806	Soybean	cytosol, plastid	28.65	27.89
GSMUA_Achr2P00850_001	Banana	nucleus, plastid	4.56	27.78
Bra024806.1-P	Field mustard	cytosol, plastid	29.56	27.69
CDY17427	Canola	cytosol, plastid	28.65	27.69
CDY39317	Canola	cytosol	28.83	26.03
AT2G02790.1	Thale cress	cytosol	29.38	25.31
CDY49085	Canola	cytosol	27.55	24.63
Bra019653.1-P	Field mustard	cytosol	28.1	24.52
AT1G14380.1	Thale cress	cytosol	29.2	24.1
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	17.52	20.87
TraesCS1B01G354600.1	Wheat	cytosol, mitochondrion	12.77	20.65
TraesCS3B01G309600.1	Wheat	mitochondrion	13.14	19.1
TraesCS3B01G127100.1	Wheat	cytosol	15.69	18.57
TraesCS7B01G244900.1	Wheat	cytosol	14.6	18.06
TraesCS5B01G160400.1	Wheat	cytosol	15.51	17.86
TraesCS1B01G142100.1	Wheat	cytosol	14.78	17.84
TraesCS2B01G492900.1	Wheat	cytosol, mitochondrion	13.14	16.51
TraesCS5B01G381100.1	Wheat	cytosol, mitochondrion	13.87	16.45
TraesCS4B01G277100.2	Wheat	cytosol, mitochondrion	12.77	14.52
TraesCS2B01G520500.3	Wheat	nucleus	18.61	11.9
TraesCS4B01G330700.1	Wheat	mitochondrion	6.75	9.34

Protein Annotations

EnsemblPlants:TraesCS3B01G276000.1	EnsemblPlantsGene:TraesCS3B01G276000	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF42
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	MapMan:35.1

Description

No Description!

Coordinates

chr3B:+:445602496..445607778

Molecular Weight (calculated)

60607.0 Da

IEP (calculated)

10.537

GRAVY (calculated)

-0.692

Length

548 amino acids

Sequence
(BLAST)

001: MGKSPAKWIK SVLLGKKSTK SNSTKAKDLP AKAANSNGCT AGKEPESSDN SPLISEPVLV SSHNVSEISN LPNGRAIENM VRVGSDTQIS PEKLREELAA
101: VKAQAAFRGY LARRAFRALK GIIRLQALIR GHLVRRQAVS TLRGTWLIVK FQALVRGRNV RFSSAATQLA VKFGQHKYGG DKSSDAWKEK LSSHPYVRKL
201: LSSPILVQAL HVQYDETNPN SALNWLERWT ISCIWKPVSK PKIVTDGKPQ VRRASYAMET HSAKLKRNVR KSSTATVETQ ANTVESEKWK RNPRKLNGSP
301: ADSVPDSQLS ELEKVKRNLK KAANSMAEAS KISTKADVLK VPNSIADELK ILGSMAELSK KSSIPNGISD HQDSECEKAL ESTREAVFPL ETQDSHSGNL
401: LENSNISKLV PDIKYDLEAS FLGDKVNEPT TVAQADEVIQ LQNLDNGYDI IERKEETRSK EEPLPNGSLK TKRRSSFSNS EYPESGTKNT PVPSRKPSYM
501: APTESLKAKL RGPPRLDSDL PVDKNAFTRR QSLPSAANNR AIKTEWRR

Best Arabidopsis Sequence Match ( AT1G14380.2 )
(BLAST)

001: MGKTPGKWIK TLLLGKKSPK SNSDNRSQKL KSAKKEELVE SVTEDLSNLT VDPPVVSSQP VPASTAQNVV SPINGDESKD NLESRNDLGE VELEQAAIKV
101: QATFRAHQAR RAFRTLKGII RLQAVIRGHL VRRQAIATYS CIWGIVKFQA LVRGQKARSS DIAIQFQKKH MEASDSEVLQ SSTCSWMDNP TKFVFVDKLL
201: ASSPTALPLK IQYGPEEPNS AKVWLERWTQ LQVWSSGSRV PRIEIPKSQS KKRNYQAVVE AEKKRPKRSI KKPSGTTSGT GPSRFTAERN KPKRNVRKAS
301: TLSKDPLRNE SDKANHNSRK SRSGSKEGSP LEIKDEKPSP SLKRSSLSNG SKKATLRSAE KKKKDIPDSS VQIQPEGKVS ENVLEEGDNI ESSGKEKDTG
401: DSVQIESEGK VLEGGDNIEF GEKEKDKADA VPIEFDIVKD EKSPVLDRTE EDELKTAETS DKAEALKCAD VKVSSENGNV GSDNTKQSEK RALLPANIDK
501: QDDGLTLSGR KIPSYMAPTA SAKARVKGEA SPRFAQAKTE INGALRRHSL PSPANGKLST TTMSPRAQKL LLASAKGSMN GDKSFTSSKD ITHKSTRTDW
601: KR

Arabidopsis Description

IQD28At1g14380 [Source:UniProtKB/TrEMBL;Acc:Q8GZ87]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.