CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043655_P002	Maize	mitochondrion	89.98	87.48
Os01t0716200-01	Rice	nucleus	65.83	64.11
TraesCS3A01G244100.1	Wheat	cytosol, plastid	60.47	61.68
TraesCS3B01G276000.1	Wheat	cytosol, plastid	60.11	61.31
TraesCS3D01G247300.1	Wheat	cytosol, plastid	59.75	60.95
HORVU3Hr1G067750.8	Barley	cytosol, plastid	57.6	57.91
KXG22418	Sorghum	cytosol, plastid	56.17	54.23
GSMUA_Achr4P30750_001	Banana	mitochondrion	17.71	36.94
GSMUA_Achr2P15790_001	Banana	cytosol	37.57	36.65
VIT_14s0108g00150.t01	Wine grape	nucleus	37.57	36.33
VIT_01s0026g01790.t01	Wine grape	cytosol	36.67	35.47
GSMUA_Achr4P30780_001	Banana	cytosol, mitochondrion	34.88	35.2
KRH56937	Soybean	cytosol	36.85	35.15
KRH03447	Soybean	nucleus	36.49	34.69
KRH54515	Soybean	cytosol	35.24	33.73
VIT_17s0000g05840.t01	Wine grape	endoplasmic reticulum, extracellular	37.57	33.71
GSMUA_Achr2P00850_001	Banana	nucleus, plastid	5.37	33.33
KRH63392	Soybean	cytosol	34.7	33.28
Bra026581.1-P	Field mustard	cytosol	32.38	31.31
CDY41676	Canola	cytosol, plastid	31.84	30.96
CDY67405	Canola	cytosol	32.02	30.92
CDY04137	Canola	cytosol, plastid	30.77	30.55
CDY04138	Canola	cytosol, plastid	30.59	30.48
Bra017409.1-P	Field mustard	cytosol, plastid	30.77	30.44
KRG99144	Soybean	cytosol, plastid	29.52	30.16
CDY45197	Canola	nucleus, plastid	31.31	30.02
KRH45861	Soybean	plastid	29.34	29.98
Solyc05g007130.2.1	Tomato	cytosol, plastid	29.34	29.76
Bra024806.1-P	Field mustard	cytosol, plastid	31.13	29.74
CDY17427	Canola	cytosol, plastid	29.87	29.45
PGSC0003DMT400045444	Potato	cytosol, plastid	29.16	29.32
KRH74806	Soybean	cytosol, plastid	29.52	29.31
CDY03037	Canola	cytosol	30.23	29.24
KRH69321	Soybean	cytosol, mitochondrion	28.98	28.77
CDY39317	Canola	cytosol	28.44	26.19
AT2G02790.1	Thale cress	cytosol	29.52	25.94
Bra019653.1-P	Field mustard	cytosol	28.8	25.64
CDY49085	Canola	cytosol	28.09	25.61
AT1G14380.1	Thale cress	cytosol	30.41	25.6
EES12687	Sorghum	cytosol, mitochondrion	16.64	19.91
KXG33342	Sorghum	mitochondrion	13.06	18.43
KXG22374	Sorghum	mitochondrion	13.06	18.3
KXG40135	Sorghum	cytosol, mitochondrion	13.06	17.55
EER94844	Sorghum	cytosol	14.67	16.43
EER93770	Sorghum	cytosol, mitochondrion	14.13	16.12
KXG21487	Sorghum	cytosol, mitochondrion	14.13	16.02
EES02320	Sorghum	mitochondrion	13.6	15.83
OQU91764	Sorghum	mitochondrion, plastid	13.6	15.05
OQU79535	Sorghum	cytosol, mitochondrion	12.16	14.69
KXG30089	Sorghum	cytosol, mitochondrion, plastid	5.9	14.67
KXG30090	Sorghum	mitochondrion	7.51	13.64
EES11606	Sorghum	nucleus	18.6	11.74
OQU93295	Sorghum	plastid	5.72	11.31

Protein Annotations

EnsemblPlants:KXG33252	EnsemblPlantsGene:SORBI_3003G277200	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF42
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:KXG33252	ProteinID:KXG33252.1	SEG:seg
SMART:SM00015	UniParc:UPI0001C80A76	UniProt:A0A1B6Q5Q5	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr3:-:61305669..61309285

Molecular Weight (calculated)

62052.1 Da

IEP (calculated)

10.325

GRAVY (calculated)

-0.736

Length

559 amino acids

Sequence
(BLAST)

001: MGKSPGKWIK SVLLGKKSTK SGSTKVNESK ADNNRYSTGE DRTLSENSPV ISEPVLVNIH KNVAVNVMAE NVSDREARQD LQNQSIVEPK SSSPSQLGED
101: QAAAKAQAAF RGYLARRSFR TLKGIIRLQA LIRGHLVRRQ AVSTLRTTWL IVKFQALVRG RNVRLSGGHT QFNVKLGQHN FGGVGSSDAW KEKLSSNAYV
201: RKLLSSPIVL EPLHFQYDKR DPNSTYNWFE RWTIGCIWKP AFQPKRVADG KPLVKKASYA METESAKLKR NIRKGSAAVA GSFHTSGESD KVKRNPKKIS
301: SFPADSVPDS QLSELEKVKR NLRKVTDSMA EASKISSSRV DSSKVCDSTA DVPKESNPVV EISKTPSLMN GISDHQGIQC ENTREASFPL ETQEYSDSDH
401: LLRYSNMDSL DLVPGLKSDR EIQLDSVSVG ENVDDPIVVA PAVEEMPLQN IDIEDNVLWK KEEARSKEEN LSNGSLRTSK RKSSFPNKSE YVENGTHATP
501: VQPRQPSYMA ATESAKAKLR AQNSPRLDSD SSAEKNGFTR RHSLPSSTKS RAIKAEWKR

Best Arabidopsis Sequence Match ( AT1G74690.1 )
(BLAST)

001: MGKSTKWLKN VLLGKKTSKS SGSKDKERVV SGKEVLVTSK VEESDVVSDL PSFEVAETNT VDRSGGMLET QNVGPEEISD DEIELPEGKS TDSQNVAPVQ
101: DHSLSDAERI QREIAATSVQ AAFRGYLARR AFWALKGIIR LQALIRGHLV RRQAVATLFS VMGIVRLQAF ARGREIRKSD IGVQVYRKCR LQLLQGNKLA
201: NPTDAYLGIK KLTANAFAQK LLASSPKVLP VHAYDTSNPN SNLIWLENWS ASCFWKPVPQ PKKTISRKPQ NRLLVEAESA KPKKSVRKVP ASNFESSSVQ
301: TSFEFEKPKR SFRKVSSQSI EPPAVEDPQI ELEKVKRSLR KVHNPVVESS IQPQRSPRKE VEKPKLGVEK TRESSYPLVH ETAEEPVNVC DEKKKQEISE
401: QPEEEVHALE MEVHTPGPLE TNEALDSSLV NQIDSNEKAM VEEKPSMEKD TKEEKTPKPN NKENSAGKEN QKSRKKGSAT SKTEREESNG HHETSPSIPS
501: YMQATKSAKA KLRLQGSPKS AEQDGTEKAT VPRRHSLPSP GNGRITSHSP RTTRLANSGD KTGNKKEKPL LSSREGNAKT TPAERKR

Arabidopsis Description

IQD31Protein IQ-DOMAIN 31 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4D8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.