CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010795_P001	Maize	cytosol, mitochondrion	64.41	78.83
Zm00001d038793_P001	Maize	cytosol	72.18	75.79
Os05t0521900-00	Rice	cytosol	63.16	68.66
TraesCS1A01G341900.1	Wheat	cytosol	59.65	68.19
TraesCS1B01G354600.1	Wheat	cytosol, mitochondrion	57.64	67.85
TraesCS1D01G344200.1	Wheat	cytosol	58.15	67.05
KXG33342	Sorghum	mitochondrion	47.12	47.47
HORVU1Hr1G075880.4	Barley	cytosol	37.34	43.19
KXG21487	Sorghum	cytosol, mitochondrion	29.32	23.73
EES02320	Sorghum	mitochondrion	28.32	23.54
KXG40135	Sorghum	cytosol, mitochondrion	24.06	23.08
EES12687	Sorghum	cytosol, mitochondrion	26.82	22.91
EER93770	Sorghum	cytosol, mitochondrion	26.32	21.43
OQU91764	Sorghum	mitochondrion, plastid	24.31	19.21
OQU79535	Sorghum	cytosol, mitochondrion	21.8	18.79
EER94844	Sorghum	cytosol	22.06	17.64
OQU93295	Sorghum	plastid	10.78	15.19
KXG22418	Sorghum	cytosol, plastid	20.3	13.99
KXG33252	Sorghum	cytosol	18.3	13.06
KXG30089	Sorghum	cytosol, mitochondrion, plastid	7.27	12.89
KXG30090	Sorghum	mitochondrion	9.27	12.01
EES11606	Sorghum	nucleus	17.79	8.01

Protein Annotations

Gene3D:1.20.5.190	MapMan:35.2	EntrezGene:8083001	UniProt:A0A1B6P9J5	InterPro:DUF4005	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	EnsemblPlants:KXG22374	ProteinID:KXG22374
ProteinID:KXG22374.1	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	PANTHER:PTHR32295
PANTHER:PTHR32295:SF30	SMART:SM00015	EnsemblPlantsGene:SORBI_3009G203400	SUPFAM:SSF52540	UniParc:UPI00081AD808	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:55214186..55216623

Molecular Weight (calculated)

43856.5 Da

IEP (calculated)

11.259

GRAVY (calculated)

-0.684

Length

399 amino acids

Sequence
(BLAST)

001: MFLGCSCSRP PLCPFSPAAT RTMGRAMRWL KKVLTGSSKK EADCRDRKAH NAAACAGGGG GGGVGLGPPP QAEKRRWSFA KPRNSVADSG RRPSSVTAVA
101: AGELLSQVRP CNCGQEREVE AAVVIQKAFR GYLARKALRA LRSLVKLQAL VRGYLVRKQT AMTLRRLQAL MRLQAKTASS RKSVEQERIV ARGVKPLAVP
201: AVHRRRLSDG GDTGFDRSPR IVEMDTCQLR CRSSRITSRY AGEYQQPGAS PLLLLHKPSA WRRLHEQELE PPHPKTTHNT PRLSAFPGYY LGSPAKPGRN
301: RDAAGSSPRY MADTASSVAR TRCQSAPKQR QQGEHAGQQE QAAEARPSVG RCGSRKQARS QLQAMDSFSF KSSETSRSRV EGSEVSDEVT RDYYLDRLW

Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Arabidopsis Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.