CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043510_P001	Maize	mitochondrion, nucleus	83.84	80.98
Zm00001d012767_P001	Maize	cytosol, mitochondrion	64.39	77.98
HORVU3Hr1G070750.1	Barley	mitochondrion	37.63	59.6
TraesCS3A01G275900.1	Wheat	mitochondrion	55.05	58.29
TraesCS3B01G309600.1	Wheat	mitochondrion	54.55	57.29
HORVU3Hr1G070760.1	Barley	mitochondrion	54.55	56.99
TraesCS3D01G275900.1	Wheat	mitochondrion	53.79	56.05
KXG22374	Sorghum	mitochondrion	47.47	47.12
Os01t0743100-00	Rice	cytosol, mitochondrion	33.84	31.38
KXG40135	Sorghum	cytosol, mitochondrion	25.0	23.8
EES02320	Sorghum	mitochondrion	27.78	22.92
KXG21487	Sorghum	cytosol, mitochondrion	27.53	22.11
EES12687	Sorghum	cytosol, mitochondrion	26.01	22.06
EER93770	Sorghum	cytosol, mitochondrion	26.52	21.43
OQU91764	Sorghum	mitochondrion, plastid	26.77	20.99
OQU79535	Sorghum	cytosol, mitochondrion	21.72	18.57
EER94844	Sorghum	cytosol	23.23	18.44
OQU93295	Sorghum	plastid	12.88	18.02
KXG22418	Sorghum	cytosol, plastid	20.96	14.34
KXG30089	Sorghum	cytosol, mitochondrion, plastid	7.83	13.78
KXG33252	Sorghum	cytosol	18.43	13.06
KXG30090	Sorghum	mitochondrion	8.08	10.39
EES11606	Sorghum	nucleus	19.19	8.58

Protein Annotations

Gene3D:1.20.5.190	MapMan:35.2	UniProt:A0A1B6Q5Z6	InterPro:DUF4005	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	ProteinID:KXG33341.1	EnsemblPlants:KXG33342	ProteinID:KXG33342
ProteinID:KXG33342.1	ProteinID:KXG33343.1	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096
PANTHER:PTHR32295	PANTHER:PTHR32295:SF17	SMART:SM00015	EnsemblPlantsGene:SORBI_3003G292000	SUPFAM:SSF52540	UniParc:UPI00081AB28E
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:62459070..62463091

Molecular Weight (calculated)

44738.8 Da

IEP (calculated)

11.589

GRAVY (calculated)

-0.935

Length

396 amino acids

Sequence
(BLAST)

001: MRRIMRWLKQ LLTGRKEEHR GHVVSGWSDG PEKEKKRWSF AKQRKSGTDG DARSSSGKDA VAPPAAVERS RQVMRPREDA RAREHRAAVL IQKTFRGYLA
101: RRALRALRSL VKIQALVRGY LVRKQAAMTL HRLQTLMRLQ ADSIAVKNAS YRKSMEQEER IFARDVQMKP LATPVHRRML SDSTDSNYER SPRIVEMDTC
201: HLRSRSSRIT SRYNPDHFPE YHYHRHAAPT PSCSPLAGGK QPQPQQQPAR LSFRRSARER DARGSKTAQS TPRCASHDSS PARSVEHSLA GTPRRRGGTQ
301: RDRDALVSPR YMAGTASSAA RTRCHSAPRQ RQTTDAEQAP RTSVASRDGA SRRSSCSHAH GGGFCFQCSD VTRTTGFSGI SVSDEVARDY YLDSFW

Best Arabidopsis Sequence Match ( AT4G14750.1 )
(BLAST)

001: MGKTSKWFRS LLTGKKERTK EHIIQSECVF TSSIPGTPKE KRRWSFRRSS ATGPPPPACA ITLKDSPPPP PPPPPPPPLQ QPFVVEIVDN EDEQIKNVSA
101: EEIEEFAAIK IQACYRSHLA RKALRALKGL VKLQALVRGH LVRKQATATL RCMQALITLQ AKAREQRIRM IGGDSTNPRT SIHKTRINNF YHENEENIKI
201: VEMDIQSKMY SPAPSALTEM SPRAYSSHFE DCNSFNTAQS SPQCFSRFKE YYNGDTLSSY DYPLFPNYMA NTQSSKAKAR SQSAPKQRPP EIYEKQMSGR
301: RRSSMEAPRN NGVPRAVRMQ RSSSQLGSNT AKESQQHHHH QYYPWMAIKL DRSNISLMES ECGSTSTVMT NTNYGRHVDV QGNNNMY

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.