Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3B01G309600.1 | Wheat | mitochondrion | 95.0 | 95.76 |
TraesCS3A01G275900.1 | Wheat | mitochondrion | 92.89 | 94.39 |
HORVU3Hr1G070760.1 | Barley | mitochondrion | 91.84 | 92.08 |
HORVU3Hr1G070750.1 | Barley | mitochondrion | 58.95 | 89.6 |
Zm00001d012767_P001 | Maize | cytosol, mitochondrion | 46.84 | 54.43 |
KXG33342 | Sorghum | mitochondrion | 56.05 | 53.79 |
TraesCS1D01G344200.1 | Wheat | cytosol | 47.89 | 52.6 |
Zm00001d043510_P001 | Maize | mitochondrion, nucleus | 51.84 | 48.05 |
Os01t0743100-00 | Rice | cytosol, mitochondrion | 41.05 | 36.53 |
TraesCS1D01G123800.1 | Wheat | cytosol | 28.95 | 24.23 |
TraesCS3D01G109900.1 | Wheat | cytosol, mitochondrion | 29.21 | 24.08 |
TraesCS2D01G470000.1 | Wheat | cytosol, mitochondrion | 25.53 | 22.2 |
TraesCS2D01G398300.1 | Wheat | cytosol, mitochondrion | 26.58 | 21.86 |
TraesCS4D01G275700.3 | Wheat | cytosol, mitochondrion | 26.84 | 21.12 |
TraesCS5D01G387500.1 | Wheat | cytosol | 25.53 | 20.95 |
TraesCS5D01G168000.2 | Wheat | nucleus | 22.11 | 17.5 |
TraesCS7D01G341000.1 | Wheat | cytosol | 18.68 | 16.03 |
TraesCS1D01G361800.3 | Wheat | cytosol, mitochondrion, plastid | 21.32 | 13.99 |
TraesCS3D01G247300.1 | Wheat | cytosol, plastid | 19.21 | 13.32 |
TraesCS4D01G327500.1 | Wheat | mitochondrion | 13.16 | 12.59 |
TraesCS2D01G492600.1 | Wheat | nucleus | 18.95 | 8.36 |
Protein Annotations
EnsemblPlants:TraesCS3D01G275900.1 | EnsemblPlantsGene:TraesCS3D01G275900 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | InterPro:P-loop_NTPase | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF17 |
PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | SEG:seg | SMART:SM00015 | SUPFAM:SSF52540 |
MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:382629574..382631448
Molecular Weight (calculated)
42346.6 Da
IEP (calculated)
11.499
GRAVY (calculated)
-0.766
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAEMGRAMR WLKRLLTGRK EAHGGGKEIH AATDWHDAAA VKESTKRWSF VKQRKSGVDA GKRPSEPLAP AREVKPCRCA GGELVGAREE KAAVVIQKAF
101: RGYLARKALR ALRSLVKLQA LVRGYLVRKQ AATTLHRLQA LMRLQADSRA FKSASYRKSM EQERIVAQDA RMRTPPAKPG HRRRLSDSTD SNYERSPRIV
201: EMDTCHLRSR SSRIASGRYA ADRSSGRLAP DLAPPFSPRS VKQPPRLSTR REPVRLAKTA QNTPRFSGAD PPYTYDSPAK SVDGLAARPL WHRDLLASPR
301: YMAGTASSAA RLRCQSVPRQ PAEAPRASLT QRDVPAGARK STCTRTQHGG LCFHSSDATH TRRSDLSDDA ARDYYLDRMW
101: RGYLARKALR ALRSLVKLQA LVRGYLVRKQ AATTLHRLQA LMRLQADSRA FKSASYRKSM EQERIVAQDA RMRTPPAKPG HRRRLSDSTD SNYERSPRIV
201: EMDTCHLRSR SSRIASGRYA ADRSSGRLAP DLAPPFSPRS VKQPPRLSTR REPVRLAKTA QNTPRFSGAD PPYTYDSPAK SVDGLAARPL WHRDLLASPR
301: YMAGTASSAA RLRCQSVPRQ PAEAPRASLT QRDVPAGARK STCTRTQHGG LCFHSSDATH TRRSDLSDDA ARDYYLDRMW
001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN
Arabidopsis Description
IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.