Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • cytosol 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G354600.1 Wheat cytosol, mitochondrion 92.49 94.4
TraesCS1A01G341900.1 Wheat cytosol 93.93 93.12
Os05t0521900-00 Rice cytosol 69.65 65.67
Zm00001d010795_P001 Maize cytosol, mitochondrion 59.25 62.88
Zm00001d038793_P001 Maize cytosol 63.87 58.16
KXG22374 Sorghum mitochondrion 67.05 58.15
HORVU1Hr1G075880.4 Barley cytosol 48.27 48.41
TraesCS3D01G275900.1 Wheat mitochondrion 52.6 47.89
TraesCS3D01G109900.1 Wheat cytosol, mitochondrion 32.95 24.73
TraesCS1D01G123800.1 Wheat cytosol 31.79 24.23
TraesCS2D01G470000.1 Wheat cytosol, mitochondrion 27.46 21.74
TraesCS5D01G387500.1 Wheat cytosol 28.61 21.38
TraesCS2D01G398300.1 Wheat cytosol, mitochondrion 28.32 21.21
TraesCS4D01G275700.3 Wheat cytosol, mitochondrion 28.61 20.5
TraesCS5D01G168000.2 Wheat nucleus 23.99 17.29
TraesCS7D01G341000.1 Wheat cytosol 20.81 16.25
TraesCS1D01G361800.3 Wheat cytosol, mitochondrion, plastid 22.83 13.64
TraesCS3D01G247300.1 Wheat cytosol, plastid 21.1 13.32
TraesCS4D01G327500.1 Wheat mitochondrion 13.01 11.34
TraesCS2D01G492600.1 Wheat nucleus 19.36 7.78
Protein Annotations
EnsemblPlants:TraesCS1D01G344200.1EnsemblPlantsGene:TraesCS1D01G344200Gene3D:1.20.5.190GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:DUF4005InterPro:IPR000048InterPro:IQ_motif_EF-hand-BSPANTHER:PTHR32295PANTHER:PTHR32295:SF30PFAM:PF00612
PFAM:PF13178PFscan:PS50096SEG:segSMART:SM00015MapMan:35.2:
Description
No Description!
Coordinates
chr1D:-:432807697..432809273
Molecular Weight (calculated)
37657.0 Da
IEP (calculated)
11.453
GRAVY (calculated)
-0.703
Length
346 amino acids
Sequence
(BLAST)
001: MGRAMRWLKK LLTGGGGKKE GAKDQSAAAP PVERRRWSFA KARSSVADAS RRPSVTAVVA GELSQSQARP CGCGQARETE AAVLMQKAFR GYLARKALRA
101: LKSLVKLQAL VRGYLVRKQA ATTLHRLQAL MRLQASSQAL KNLSSRRSIQ QERKTSVPVA HRRRLSEGGA GDDRSPRIVE MDTCQLRCRS SRIAGRYAAA
201: DPQAPPISSP LAYFCKPPSR LQVRELEPRQ PKTTQNTPRL PAIVPGGSPA KARPSCGGGG GRESSSPRYM ADTASSVARG RCQSAPRQRH GSNNPALARG
301: GSRKAAPQPQ SQDSLSFKSS EACSRVEDYS EMSDEVTRDY YLDQLW
Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)
001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN
Arabidopsis Description
IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.