Factsheet for TraesCS1A01G341900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G354600.1	Wheat	cytosol, mitochondrion	91.98	94.69
TraesCS1D01G344200.1	Wheat	cytosol	93.12	93.93
Os05t0521900-00	Rice	cytosol	70.77	67.3
Zm00001d010795_P001	Maize	cytosol, mitochondrion	59.6	63.8
KXG22374	Sorghum	mitochondrion	68.19	59.65
Zm00001d038793_P001	Maize	cytosol	64.47	59.21
HORVU1Hr1G075880.4	Barley	cytosol	48.42	48.99
TraesCS3A01G275900.1	Wheat	mitochondrion	52.15	48.66
TraesCS1A01G122900.1	Wheat	cytosol, plastid	31.81	24.45
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	32.38	24.2
TraesCS5A01G055100.1	Wheat	cytosol, mitochondrion	24.93	21.64
TraesCS5A01G377500.1	Wheat	cytosol	28.37	21.43
TraesCS4A01G028700.1	Wheat	cytosol, mitochondrion	27.79	21.32
TraesCS2A01G470100.1	Wheat	cytosol, mitochondrion	26.36	21.2
TraesCS5A01G163000.1	Wheat	nucleus	23.5	17.23
TraesCS7A01G332500.1	Wheat	cytosol, mitochondrion	21.78	17.16
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	22.35	13.47
TraesCS3A01G244100.1	Wheat	cytosol, plastid	20.92	13.32
TraesCS5A01G502100.1	Wheat	cytosol, plastid	12.03	10.94
TraesCS2A01G492300.1	Wheat	nucleus	19.48	7.9

Protein Annotations

EnsemblPlants:TraesCS1A01G341900.1	EnsemblPlantsGene:TraesCS1A01G341900	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	ncoils:Coil	PANTHER:PTHR32295
PANTHER:PTHR32295:SF30	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015
SUPFAM:SSF52540	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:531281328..531283015

Molecular Weight (calculated)

37939.3 Da

IEP (calculated)

11.248

GRAVY (calculated)

-0.672

Length

349 amino acids

Sequence
(BLAST)

001: MGRAMRWLKK VLTGGGGKKE GAKEPSAAVP PIERRRWSFA KARSSVADAS RRPSVTAVVA GELSQARPCG CGQARETETE AAVLIQKAFR GYLARKALRA
101: LKSLVKLQAL VRGYLVRKQA ATTLHRLQAL MRLQASSQAL KNLSSSRRSI EQERKTSVPV VHRRRLSEGG AGDDRSPRIV EMDTCQLRCR SSRIAGRYAA
201: ADPQAPPPSS PLAYFCKPPS RLQLRELEPQ QPKTTQNTPR LPAIVPGGSP AKGRPSCGGG RESSSPRYMA ETASSVARGR CQSAPRQRHG NNNPAAGLAP
301: GLARGGSRKA APQSQDSFSF KSSEACSRVE DYSEMSDEVT RDYYLDQLW

Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Arabidopsis Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.