Factsheet for TraesCS2A01G492300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G492600.1	Wheat	nucleus	97.33	97.33
TraesCS2B01G520500.3	Wheat	nucleus	95.24	95.68
HORVU2Hr1G109850.3	Barley	nucleus	77.7	93.57
Os04t0663100-01	Rice	plasma membrane	68.18	65.73
EES11606	Sorghum	nucleus	64.34	62.53
Zm00001d026535_P003	Maize	nucleus	61.79	59.05
Zm00001d001953_P003	Maize	nucleus	62.14	58.34
GSMUA_Achr3P11240_001	Banana	nucleus	31.94	35.21
VIT_18s0001g13870.t01	Wine grape	nucleus	31.36	34.09
GSMUA_Achr1P06080_001	Banana	nucleus	30.31	33.5
GSMUA_Achr1P19900_001	Banana	cytosol	9.06	33.48
Solyc04g081210.2.1	Tomato	nucleus	31.71	31.67
GSMUA_Achr1P19910_001	Banana	nucleus	21.95	31.61
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	31.01	31.56
PGSC0003DMT400009545	Potato	nucleus	31.48	31.22
CDX83739	Canola	nucleus	24.39	28.42
KRH51729	Soybean	cytosol	27.99	28.39
CDY62588	Canola	nucleus	24.39	28.34
CDY44186	Canola	nucleus, plastid	24.04	28.32
Bra016490.1-P	Field mustard	nucleus	24.27	28.28
Bra025777.1-P	Field mustard	nucleus, plastid	24.27	28.09
CDY29389	Canola	nucleus, plastid	24.27	27.94
AT1G19870.1	Thale cress	nucleus	24.39	26.45
KRH61064	Soybean	nucleus	20.33	24.07
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	13.94	20.73
TraesCS2A01G470100.1	Wheat	cytosol, mitochondrion	10.34	20.51
TraesCS1A01G122900.1	Wheat	cytosol, plastid	10.8	20.48
TraesCS5A01G377500.1	Wheat	cytosol	10.8	20.13
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	10.8	19.91
TraesCS3A01G275900.1	Wheat	mitochondrion	8.59	19.79
TraesCS4A01G028700.1	Wheat	cytosol, mitochondrion	10.34	19.56
TraesCS1A01G341900.1	Wheat	cytosol	7.9	19.48
TraesCS3A01G244100.1	Wheat	cytosol, plastid	12.08	18.98
TraesCS5A01G163000.1	Wheat	nucleus	10.1	18.28
TraesCS5A01G055100.1	Wheat	cytosol, mitochondrion	8.25	17.66
TraesCS7A01G332500.1	Wheat	cytosol, mitochondrion	7.78	15.12
TraesCS5A01G502100.1	Wheat	cytosol, plastid	3.95	8.85
CDX75112	Canola	cytosol	1.28	7.91

Protein Annotations

EnsemblPlants:TraesCS2A01G492300.1	EnsemblPlantsGene:TraesCS2A01G492300	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF16	PFAM:PF00612	PFscan:PS50096
SEG:seg	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:724619791..724624911

Molecular Weight (calculated)

94384.5 Da

IEP (calculated)

4.700

GRAVY (calculated)

-0.895

Length

861 amino acids

Sequence
(BLAST)

001: MTKSKNGCLK ILCGGAGSDA TAGSDPETDA HADESKAISD KSRWSFRRRS TRHRVLKNSD ISEPETLSSS KAKADVAPSN NVYSSTYSYA SEKPLHLEKP
101: DEKIVLQEKP DEKSLLEEKP DEKQTEKTTE KPVDQIIERS IEQPDEKITE TPSEEPAERI SEKPVEEPAE KDVEELDEKP DESFSVSPTE VKQDETASLV
201: DRSVPDPEED HVESAAIVIQ SGIRTYNARQ ELSNHKDLVK LQAVIRGHLV RRQAAESLQC LLAIVKTQGL VRTHQAQQSS GRFQDTLVRS SSEKLLHNGF
301: ALKLMDNMST SKSMNIRCDA SETDATWKWM ERWTTLILPT TEGHLLENAE NSGLVVEKME EDAHREEKVV PLDSDISFPK LVPDDVEETL RPSESSAFVE
401: ETPRSFDLSG LEAPECVPEE TSMLETKGDP APELIEKVDD DAEQLTDSKT ENVVEQSLDF SGRQSTQTGP SREPSPVPEK SEHPSEDTMD AYNLEQSPEM
501: EARSAARKAC NPAFAAAQMK FEELTSAVSR SNSSSFLDAP SKSKVHTPRS LGGTSPKQNI ETVAPGSTVG HDAKIIPAAS ECGTEISISS TLDSPDRSEA
601: DGGEIVMEMG ALGGRDYASE NAEKDTHVLH SEVKDTSEEV VQPEKEEELN GDVANPPIAT DPVLEQAHVE SGKPDLHDQI EESIGSYAKS PEGTPMSRTT
701: FVESQCTPSS EVSVNTNKSK SKSKKSKSHA SRRSLTSPSS NSVGRSSTDN LSKDYKHAKR ESSGKVAKSD NADQEPRMSN STPLPSYMQF TESARAKAAA
801: LSPKLSPDVQ DNNPRKRHSL PITNGKNETS PRMQRSSSQA QQNVKSSVAV PHTPSDKRWN I

Best Arabidopsis Sequence Match ( AT1G19870.1 )
(BLAST)

001: MGRSPASSCL RLISCSGGDD TSADPNSTAL ENKSSGDKRG WSFRKKSGKQ RGLITSVVSE TTPASRTRET LESALLKSPS PDNNNVSEKQ QQSFSVDEKK
101: SQLPVVTYVA EPVDEKKTQS VIEEKTELLS VEEQIDHRTE VSPVIVESKG TETEEDDLIG TELQGPSAAD AAKIEEDVTS EVEMASKVEP EESESDDVII
201: VRKESDEKVD EKLDESVIVV IQAAVRGFLA RRELLRSKKV IKLQAAVRGH LVRSQAMGSL RCVQAIVKMQ AMVRARHSTK DGSRVSATSD KSEPNAAAQK
301: LLENKFAKHL MESTPKTKPI NIKCDPTKPS SAWNWLERWM SVPKPEKTSK ANLTTEEQNL EETQNVKISP QADFVNSDST VENKTETDMP SYEASKVEGQ
401: NVELSETEKM SQYDSPEASA EVYYDSIQSQ PLAAKPDSLL EEPEYVDGQI KHSLKRKVSN PSFIAAQSKF EELTSSTGSN KAMTLSSKDD VLGEEGKTDI
501: DSPDTTNTIK DHSLEDVTPA ELSGSECGTE LSVTSSLDTL EKKSDAEGAE PRVEAKLLED DTFKTDQAEL IEIDVKDATS MGTVEDPKEK VENAKDEVEI
601: SATHHEPVIS TPDSKKRRAE DESGPQAYAL SEGALTPMTI TESQATPASQ ASSSVKARKG KSEKSGSSQK RKVSKKITSS PKQEIGTGEA TEQEEGKEQK
701: SGRRTSFGYD QEARESSGGK NSLPRFMQPT QSAKAKVQEH NSPRSSPDLQ ERDVVSAKKR HSLPGVTNGK QVSPRIQRSA SQAQQGTKDR KWQR

Arabidopsis Description

IQD32Protein IQ-DOMAIN 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.