Factsheet for PGSC0003DMT400009545

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g081210.2.1	Tomato	nucleus	91.13	91.76
VIT_18s0001g13870.t01	Wine grape	nucleus	47.58	52.15
KRH51729	Soybean	cytosol	40.9	41.81
GSMUA_Achr1P19900_001	Banana	cytosol	10.6	39.48
CDY44186	Canola	nucleus, plastid	32.26	38.3
GSMUA_Achr1P06080_001	Banana	nucleus	33.53	37.36
CDY62588	Canola	nucleus	31.57	36.98
CDY29389	Canola	nucleus, plastid	31.8	36.9
KRH61064	Soybean	nucleus	30.88	36.86
Bra016490.1-P	Field mustard	nucleus	31.34	36.81
CDX83739	Canola	nucleus	31.34	36.81
GSMUA_Achr3P11240_001	Banana	nucleus	33.06	36.75
Bra025777.1-P	Field mustard	nucleus, plastid	31.11	36.29
AT1G19870.1	Thale cress	nucleus	33.18	36.27
GSMUA_Achr1P19910_001	Banana	nucleus	24.19	35.12
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	32.14	32.98
TraesCS2A01G492300.1	Wheat	nucleus	31.22	31.48
TraesCS2D01G492600.1	Wheat	nucleus	30.88	31.13
TraesCS2B01G520500.3	Wheat	nucleus	30.53	30.92
Os04t0663100-01	Rice	plasma membrane	31.57	30.68
EES11606	Sorghum	nucleus	30.53	29.91
Zm00001d001953_P003	Maize	nucleus	30.18	28.57
Zm00001d026535_P003	Maize	nucleus	29.38	28.3
PGSC0003DMT400009431	Potato	mitochondrion	3.92	25.95
PGSC0003DMT400042595	Potato	nucleus	4.38	25.0
PGSC0003DMT400033127	Potato	cytosol, mitochondrion	10.14	21.73
PGSC0003DMT400014796	Potato	cytosol	8.87	21.39
PGSC0003DMT400003322	Potato	cytosol	13.36	20.79
PGSC0003DMT400000953	Potato	cytosol	8.53	20.33
PGSC0003DMT400045444	Potato	cytosol, plastid	13.02	20.32
PGSC0003DMT400007855	Potato	cytosol, plastid	11.52	20.0
PGSC0003DMT400037043	Potato	mitochondrion, nucleus	10.48	19.12
PGSC0003DMT400021096	Potato	nucleus	4.72	18.55
PGSC0003DMT400017589	Potato	cytosol, plastid	8.99	18.14
PGSC0003DMT400016500	Potato	nucleus	5.41	17.67
HORVU2Hr1G124440.1	Barley	cytosol	0.81	11.48

Protein Annotations

Gene3D:1.20.5.190	EntrezGene:102588969	MapMan:35.1	InterPro:DUF4005	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0005856	GO:GO:0005875	GO:GO:0005886	GO:GO:0008150	GO:GO:0009536
GO:GO:0009719	GO:GO:0009737	GO:GO:0009941	GO:GO:0016020	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS
UniProt:M0ZWG6	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF13178	EnsemblPlantsGene:PGSC0003DMG400003722	PGSC:PGSC0003DMG400003722
EnsemblPlants:PGSC0003DMT400009545	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF16	SMART:SM00015	SUPFAM:SSF52540
UniParc:UPI0002955363	RefSeq:XP_006342022.1	SEG:seg	:	:	:

Description

Iqd32 (IQ-domain 32); calmodulin binding [Source:PGSC_GENE;Acc:PGSC0003DMG400003722]

Coordinates

chr4:+:70582358..70588266

Molecular Weight (calculated)

95083.1 Da

IEP (calculated)

5.644

GRAVY (calculated)

-0.940

Length

868 amino acids

Sequence
(BLAST)

001: MGKSTASSCL KIIACGSDSV DRDELEAHPE SKSSSDKRGW SFRKKSARHR VLSNTVVSET PSGNKDWPEA ANANLQTQSN STIPEKASVV QWADEKPQFP
101: TVEKSQVSAD EKPQVLANEN PQISEDEKPQ VLEDEKLQVS VDEKPQVSTD AKPQLLVEVS VDEKPLISEK VNLEVSEDEK PSVSSDEKAP ISSEENSLLS
201: DLVDAKQSEP VTARVNDGKA DVILDEHALV IQTAVRAFLA RRAQLKQKHI TKLQAAVRGH LVRRHAVGTL RCVQAIVKMQ TLVRAHHTNR IAEGSSIKEK
301: LKGKENSGTK SEFTYISISK LLSNSFARQL LESTPRTKSI NIKCDPSKSD SAWKWLERWM SVASPGNQLS PQSELSAEQQ ENEPTEHHSN LMESKVQLDS
401: ESMDFREGEE ASLSAVPSES DDNLITYDAD SLDFQADIPT LPPQPLNVDE KTSRDDCSIP TQLKEARALP EMEPNSFPAN TEVEREDTHS LELSETESKK
501: ILHGSRKASN PAFIAAQSKF EELTLAAKST KVTSLPNHKT EDESSEDTFS TITDHSFGAR EAAPSENSVP HSTRAQVGGS ECGTELSISS TLDSPDRSDV
601: GGHVFEQELP SNGGTDHRKS NGYPHIEDDS TNDLSHSDYV QAGREDPTDD AKHVDVMVSS DLSPEEQKPE NNSVNVQIEH EAKTDRLYKS SPDASPRSHI
701: TVPESQGTPS SQVSVNPKKL KSENSGSIPK PRSAPASKKS PSKLNHAPGT TSSEQLSKDH NKNEKRRNSF GSTKAGQADQ EARDNSTSSS LPSYMQATES
801: ARAKVIPNSS PRSSPDVHNK DEYIKKRHSL PGSNGRQGSP RIQRSLSNAQ QGAKGNGTQS PQERKWQR

Best Arabidopsis Sequence Match ( AT1G19870.1 )
(BLAST)

001: MGRSPASSCL RLISCSGGDD TSADPNSTAL ENKSSGDKRG WSFRKKSGKQ RGLITSVVSE TTPASRTRET LESALLKSPS PDNNNVSEKQ QQSFSVDEKK
101: SQLPVVTYVA EPVDEKKTQS VIEEKTELLS VEEQIDHRTE VSPVIVESKG TETEEDDLIG TELQGPSAAD AAKIEEDVTS EVEMASKVEP EESESDDVII
201: VRKESDEKVD EKLDESVIVV IQAAVRGFLA RRELLRSKKV IKLQAAVRGH LVRSQAMGSL RCVQAIVKMQ AMVRARHSTK DGSRVSATSD KSEPNAAAQK
301: LLENKFAKHL MESTPKTKPI NIKCDPTKPS SAWNWLERWM SVPKPEKTSK ANLTTEEQNL EETQNVKISP QADFVNSDST VENKTETDMP SYEASKVEGQ
401: NVELSETEKM SQYDSPEASA EVYYDSIQSQ PLAAKPDSLL EEPEYVDGQI KHSLKRKVSN PSFIAAQSKF EELTSSTGSN KAMTLSSKDD VLGEEGKTDI
501: DSPDTTNTIK DHSLEDVTPA ELSGSECGTE LSVTSSLDTL EKKSDAEGAE PRVEAKLLED DTFKTDQAEL IEIDVKDATS MGTVEDPKEK VENAKDEVEI
601: SATHHEPVIS TPDSKKRRAE DESGPQAYAL SEGALTPMTI TESQATPASQ ASSSVKARKG KSEKSGSSQK RKVSKKITSS PKQEIGTGEA TEQEEGKEQK
701: SGRRTSFGYD QEARESSGGK NSLPRFMQPT QSAKAKVQEH NSPRSSPDLQ ERDVVSAKKR HSLPGVTNGK QVSPRIQRSA SQAQQGTKDR KWQR

Arabidopsis Description

IQD32Protein IQ-DOMAIN 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.