Factsheet for PGSC0003DMT400016500

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g082560.2.1	Tomato	nucleus	95.49	54.39
HORVU2Hr1G106540.1	Barley	cytosol, nucleus	36.47	32.12
TraesCS2B01G492900.1	Wheat	cytosol, mitochondrion	43.23	26.38
TraesCS2D01G470000.1	Wheat	cytosol, mitochondrion	42.86	26.09
PGSC0003DMT400042595	Potato	nucleus	14.66	25.66
HORVU2Hr1G106550.2	Barley	mitochondrion	41.73	25.58
TraesCS2A01G470100.1	Wheat	cytosol, mitochondrion	41.73	25.58
GSMUA_Achr4P21190_001	Banana	cytosol	18.42	24.38
Zm00001d032932_P001	Maize	mitochondrion	39.1	24.3
Zm00001d048437_P002	Maize	mitochondrion	34.59	23.23
KXG40135	Sorghum	cytosol, mitochondrion	35.71	22.84
Os03t0161400-01	Rice	cytosol, mitochondrion	34.59	22.44
OQU91764	Sorghum	mitochondrion, plastid	39.85	20.99
Os10t0420200-01	Rice	mitochondrion	25.94	20.29
TraesCS4A01G028700.1	Wheat	cytosol, mitochondrion	34.59	20.22
HORVU4Hr1G073480.2	Barley	cytosol, mitochondrion	33.08	19.34
TraesCS4B01G277100.2	Wheat	cytosol, mitochondrion	34.21	18.88
TraesCS4D01G275700.3	Wheat	cytosol, mitochondrion	34.21	18.84
PGSC0003DMT400000953	Potato	cytosol	21.43	15.66
PGSC0003DMT400021096	Potato	nucleus	11.65	14.03
PGSC0003DMT400007855	Potato	cytosol, plastid	24.06	12.8
HORVU6Hr1G003870.1	Barley	cytosol, mitochondrion	13.53	11.69
PGSC0003DMT400014796	Potato	cytosol	15.04	11.11
HORVU4Hr1G056380.1	Barley	cytosol, mitochondrion	13.91	11.08
PGSC0003DMT400037043	Potato	mitochondrion, nucleus	18.42	10.29
PGSC0003DMT400033127	Potato	cytosol, mitochondrion	13.91	9.14
PGSC0003DMT400003322	Potato	cytosol	17.29	8.24
PGSC0003DMT400017589	Potato	cytosol, plastid	12.78	7.91
PGSC0003DMT400045444	Potato	cytosol, plastid	16.17	7.73
PGSC0003DMT400009545	Potato	nucleus	17.67	5.41
PGSC0003DMT400009431	Potato	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400016500	EnsemblPlantsGene:PGSC0003DMG400006444	InterPro:DUF4005	PANTHER:PTHR32295	PANTHER:PTHR32295:SF45	PFAM:PF13178
PGSC:PGSC0003DMG400006444	UniParc:UPI000294DB01	UniProt:M1A7R3	MapMan:35.2	:	:

Description

Calmodulin binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400006444]

Coordinates

chr9:-:54306102..54307744

Molecular Weight (calculated)

30803.0 Da

IEP (calculated)

8.283

GRAVY (calculated)

-1.308

Length

266 amino acids

Sequence
(BLAST)

001: MAEDESPNNP RQSVHRKSTQ DNKFRHSYQD YEEDIKIVEM DLGESKGNTK SRNCYSNQGE TERTEHRFST HNAYTNQEHH QQIISPVPSA ITDQSPKAYS
101: GHFEDYTSYP TTQSSPQYYN NTMSKPDPSR IPYSSYARSE YAEPESLYNE YPFYPSYMAN TKSSMAKARS HSAPKQRPDQ TSFERQPSRR RPSIEGRNVP
201: RAVKMQRSSS HVGSTAQNYQ YPWSIKLDKS NISIKDSECG SNCSVFTTHT NYCRSLFGFD VQEHRY

Best Arabidopsis Sequence Match ( AT4G14750.2 )
(BLAST)

001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVQ GNNNMY

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.