Factsheet for PGSC0003DMT400045444

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 3
plastid 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g007130.2.1	Tomato	cytosol, plastid	91.73	92.56
PGSC0003DMT400003322	Potato	cytosol	34.35	34.23
CDY45197	Canola	nucleus, plastid	35.25	33.62
KRH74806	Soybean	cytosol, plastid	33.81	33.39
KRH45861	Soybean	plastid	32.73	33.27
CDY41676	Canola	cytosol, plastid	34.35	33.22
Bra024806.1-P	Field mustard	cytosol, plastid	34.89	33.16
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	34.35	32.99
Os05t0535900-01	Rice	cytosol	33.99	32.93
CDY17427	Canola	cytosol, plastid	33.45	32.8
Bra017409.1-P	Field mustard	cytosol, plastid	33.27	32.74
Bra026581.1-P	Field mustard	cytosol	33.99	32.7
CDY03037	Canola	cytosol	33.99	32.7
CDY67405	Canola	cytosol	33.99	32.64
GSMUA_Achr8P26180_001	Banana	mitochondrion	30.76	32.57
CDY04137	Canola	cytosol, plastid	32.91	32.5
KRH69321	Soybean	cytosol, mitochondrion	32.91	32.5
TraesCS1D01G361800.3	Wheat	cytosol, mitochondrion, plastid	33.81	32.47
CDY04138	Canola	cytosol, plastid	32.55	32.26
TraesCS1B01G374100.2	Wheat	cytosol, mitochondrion	33.27	31.95
GSMUA_AchrUn_...	Banana	mitochondrion	28.78	31.62
Zm00001d038838_P001	Maize	mitochondrion	32.55	31.53
KXG22418	Sorghum	cytosol, plastid	32.55	31.26
KRG99144	Soybean	cytosol, plastid	30.58	31.08
Zm00001d011138_P003	Maize	cytosol, plastid	32.73	30.8
TraesCS3B01G276000.1	Wheat	cytosol, plastid	30.22	30.66
HORVU1Hr1G080360.4	Barley	mitochondrion	32.37	30.56
TraesCS3A01G244100.1	Wheat	cytosol, plastid	30.04	30.47
TraesCS3D01G247300.1	Wheat	cytosol, plastid	30.04	30.47
Os01t0716200-01	Rice	nucleus	30.58	29.62
HORVU3Hr1G067750.8	Barley	cytosol, plastid	29.5	29.5
AT2G02790.1	Thale cress	cytosol	33.45	29.25
KXG33252	Sorghum	cytosol	29.32	29.16
AT1G14380.1	Thale cress	cytosol	34.35	28.77
CDY39317	Canola	cytosol	30.94	28.34
Zm00001d043655_P002	Maize	mitochondrion	28.6	27.65
CDY49085	Canola	cytosol	30.4	27.57
PGSC0003DMT400009431	Potato	mitochondrion	6.47	27.48
Bra019653.1-P	Field mustard	cytosol	30.4	26.91
PGSC0003DMT400000953	Potato	cytosol	13.31	20.33
PGSC0003DMT400014796	Potato	cytosol	12.41	19.17
PGSC0003DMT400033127	Potato	cytosol, mitochondrion	13.67	18.77
PGSC0003DMT400007855	Potato	cytosol, plastid	15.47	17.2
PGSC0003DMT400042595	Potato	nucleus	4.68	17.11
PGSC0003DMT400037043	Potato	mitochondrion, nucleus	14.57	17.02
PGSC0003DMT400017589	Potato	cytosol, plastid	12.77	16.51
PGSC0003DMT400016500	Potato	nucleus	7.73	16.17
PGSC0003DMT400021096	Potato	nucleus	5.22	13.12
PGSC0003DMT400009545	Potato	nucleus	20.32	13.02

Protein Annotations

Gene3D:1.20.5.190	EntrezGene:102601298	MapMan:35.1	InterPro:DUF4005	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	UniProt:M1BHP0	PFAM:PF00612	PFAM:PF13178
EnsemblPlantsGene:PGSC0003DMG400017629	PGSC:PGSC0003DMG400017629	EnsemblPlants:PGSC0003DMT400045444	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF48
SMART:SM00015	UniParc:UPI0002954223	RefSeq:XP_006357270.1	RefSeq:XP_006357271.1	RefSeq:XP_006357272.1	RefSeq:XP_015168814.1
SEG:seg	:	:	:	:	:

Description

Calmodulin binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400017629]

Coordinates

chr5:-:5870362..5877158

Molecular Weight (calculated)

61298.4 Da

IEP (calculated)

10.364

GRAVY (calculated)

-0.828

Length

556 amino acids

Sequence
(BLAST)

001: MGKSPGKWLR SLLPGKKSSK SGTSKKSSNE KASVISTNAA LSGSSVHLPL ISEPVAGNSG GIKEDSNFEK GEVTDEVILP SIERDGDEQN TCLTLPEDTE
101: KMRLEQAAMK AQAIVRGYLA RRAFLRLKGT IRLQAAVRGH LVRRQAVATL YCIHGIVKLQ AHIRGQIIRR SSIGCELITK QGLEKQDAKQ LDYQRTNASK
201: LARELSKNEF TTKLLASSPT VMPLHLHYGP EEPNSSQEWL VRWTISQIWQ PQPKSETLSR KKHQNVEADI AMSKHSGRKL HSRKMQNGSN HSTSSGSEKK
301: KSSHLVNSVL QNPGSEIKKV KHSVKKMSSP ILEKPIQSEV DTERKRQSHD KLSSMTSDEP LQNSEGIVEN STNVAPSQET LGVDDTISRL DILSVSDTLH
401: KSTTDAAYQK PITDNQEDDT PVANEDSCTN HDNNEGNESN KVNRRVSLPA KHDVDASTPT TPTTRKVPSY MAPTKSAKAK LKEQASPRFG QDVAEKNAVT
501: RRHSLPSPMN GKLSSSPSPR VQRLVQASAK EGIKIDRSLS SSRDGTDKMT RAEWKR

Best Arabidopsis Sequence Match ( AT1G14380.7 )
(BLAST)

001: MGKTPGKWIK TLLLGKKSPK SNSDNRSQKL KSAKKEELVE SVTEDLSNLT VDPPVVSSQP VPASTAQNVV SPINGDESKD NLESRNDLGE VELEQAAIKV
101: QATFRAHQAR RAFRTLKGII RLQAVIRGHL VRRQAIATYS CIWGIVKFQA LVRGQKARSS DIAIQFQKKH MEASDSEVLQ SSTCSWMDNP TKFVFVDKLL
201: ASSPTALPLK IQYGPEEPNS AKVWLERWTQ LQVWSSGSRV PRIEIPKSQS KKRNYQAVVE AEKKRPKRSI KKPSGTTSGT GPSRFTAERN KPKRNVRKAS
301: TLSKDPLRNE SDKANHNSRK SRSGSKEGSP LEIKDEKPSP SLKRSSLSNG SKKATLRSAE KKKKDIPDSS VQIQPEGKVS ENVLEGGDNI EFGEKEKDKA
401: DAVPIEFDIV KDEKSPVLDR TEEDELKTAE TSDKAEALKC ADVKVSSENG NVGSDNTKQS EKRALLPANI DKQDDGLTLS GRKIPSYMAP TASAKARVKG
501: EASPRFAQAK TEINGALRRH SLPSPANGKL STTTMSPRAQ KLLLASAKGS MNGDKSFTSS KDITHKSTRT DWKR

Arabidopsis Description

IQD28At1g14380 [Source:UniProtKB/TrEMBL;Acc:Q8GZ87]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.