Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400070433 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G74690.1 | PGSC0003DMT400070433 | AT1G12310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g087760.2.1 | Tomato | nucleus | 94.62 | 94.96 |
| Bra008163.1-P | Field mustard | cytosol | 36.56 | 39.53 |
| AT1G18840.1 | Thale cress | cytosol | 37.99 | 37.06 |
| AT1G74690.1 | Thale cress | cytosol | 38.89 | 36.97 |
| CDY19251 | Canola | cytosol, mitochondrion | 36.56 | 36.43 |
| Bra025690.1-P | Field mustard | cytosol, mitochondrion | 36.74 | 36.35 |
| CDY26720 | Canola | cytosol, mitochondrion | 36.74 | 36.35 |
| CDX83805 | Canola | cytosol, mitochondrion | 34.95 | 34.95 |
| PGSC0003DMT400045444 | Potato | cytosol, plastid | 34.23 | 34.35 |
| PGSC0003DMT400009431 | Potato | mitochondrion | 6.99 | 29.77 |
| Bra016536.1-P | Field mustard | nucleus | 35.48 | 29.42 |
| CDX96693 | Canola | nucleus | 35.48 | 29.42 |
| PGSC0003DMT400014796 | Potato | cytosol | 16.31 | 25.28 |
| PGSC0003DMT400000953 | Potato | cytosol | 14.16 | 21.7 |
| PGSC0003DMT400037043 | Potato | mitochondrion, nucleus | 18.46 | 21.64 |
| PGSC0003DMT400033127 | Potato | cytosol, mitochondrion | 15.41 | 21.23 |
| PGSC0003DMT400021096 | Potato | nucleus | 8.24 | 20.81 |
| PGSC0003DMT400007855 | Potato | cytosol, plastid | 18.28 | 20.4 |
| PGSC0003DMT400017589 | Potato | cytosol, plastid | 14.7 | 19.07 |
| PGSC0003DMT400016500 | Potato | nucleus | 8.24 | 17.29 |
| PGSC0003DMT400042595 | Potato | nucleus | 4.66 | 17.11 |
| PGSC0003DMT400009545 | Potato | nucleus | 20.79 | 13.36 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400003322 | EnsemblPlantsGene:PGSC0003DMG400001315 | EntrezGene:102591944 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | ncoils:Coil | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF42 |
| PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | PGSC:PGSC0003DMG400001315 | RefSeq:XP_006338473.1 | RefSeq:XP_006338474.1 |
| SEG:seg | SMART:SM00015 | UniParc:UPI000295843F | UniProt:M0ZLF6 | MapMan:35.1 | : |
Description
Calmodulin binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400001315]
Coordinates
chr2:-:46382552..46388752
Molecular Weight (calculated)
61353.4 Da
IEP (calculated)
10.250
GRAVY (calculated)
-0.781
Length
558 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKSPAKWI KAVLFGKKSS KSHLSKDASG EKISSAKAPV GDLSLDSPSL DLPVQNFDNG GDQAGLEKGT STDFACETAS LSSATHDIEP HVNGTISTDD
101: AELKRQEHAA TIAQAAFRGY LARRAFRALK GIIRLQALIR GHLVRRQAVS TLRCMQAIVR IQALARGRRI RLLDPGHQLL GKYNFEELKD PEQRPAKLTA
201: YAFPRKLLVA VPTAMPLSLQ YDECEPNSAW QWLERWSLSR FWEPLPQPKK VVGAKSLKKQ GNKPSVETEA VRPKRSVKKV LTASNGDAYA VSSSEPEKAK
301: RNPRKFSNHH IEPVQDQPQN ELEKVKRNLR KVSAALATSS ERSETEIEKA QQTPNLAQAQ AQAIASKSSA PDVVEQMMVN SYEKTSDSVP EIEKLAESEA
401: PLPVPVDEPS DVLHDHPTTE QQQSEDVNNT ANSPVVNEEL SSMEDQTTKE RIRRRKSLPT KQDNSENISQ NTPSVPSYMA ATQSAKAKLK AQGSPKVSDD
501: GAENGFVRRH SLPSSANGKF NSLSPRIQKP GQANGKGGNK TRPMPSSKDE KVLPGWRR
101: AELKRQEHAA TIAQAAFRGY LARRAFRALK GIIRLQALIR GHLVRRQAVS TLRCMQAIVR IQALARGRRI RLLDPGHQLL GKYNFEELKD PEQRPAKLTA
201: YAFPRKLLVA VPTAMPLSLQ YDECEPNSAW QWLERWSLSR FWEPLPQPKK VVGAKSLKKQ GNKPSVETEA VRPKRSVKKV LTASNGDAYA VSSSEPEKAK
301: RNPRKFSNHH IEPVQDQPQN ELEKVKRNLR KVSAALATSS ERSETEIEKA QQTPNLAQAQ AQAIASKSSA PDVVEQMMVN SYEKTSDSVP EIEKLAESEA
401: PLPVPVDEPS DVLHDHPTTE QQQSEDVNNT ANSPVVNEEL SSMEDQTTKE RIRRRKSLPT KQDNSENISQ NTPSVPSYMA ATQSAKAKLK AQGSPKVSDD
501: GAENGFVRRH SLPSSANGKF NSLSPRIQKP GQANGKGGNK TRPMPSSKDE KVLPGWRR
001: MGKSTKWLKN VLLGKKTSKS SGSKDKERVV SGKEVLVTSK VEESDVVSDL PSFEVAETNT VDRSGGMLET QNVGPEEISD DEIELPEGKS TDSQNVAPVQ
101: DHSLSDAERI QREIAATSVQ AAFRGYLARR AFWALKGIIR LQALIRGHLV RRQAVATLFS VMGIVRLQAF ARGREIRKSD IGVQVYRKCR LQLLQGNKLA
201: NPTDAYLGIK KLTANAFAQK LLASSPKVLP VHAYDTSNPN SNLIWLENWS ASCFWKPVPQ PKKTISRKPQ NRLLVEAESA KPKKSVRKVP ASNFESSSVQ
301: TSFEFEKPKR SFRKVSSQSI EPPAVEDPQI ELEKVKRSLR KVHNPVVESS IQPQRSPRKE VEKPKLGVEK TRESSYPLVH ETAEEPVNVC DEKKKQEISE
401: QPEEEVHALE MEVHTPGPLE TNEALDSSLV NQIDSNEKAM VEEKPSMEKD TKEEKTPKPN NKENSAGKEN QKSRKKGSAT SKTEREESNG HHETSPSIPS
501: YMQATKSAKA KLRLQGSPKS AEQDGTEKAT VPRRHSLPSP GNGRITSHSP RTTRLANSGD KTGNKKEKPL LSSREGNAKT TPAERKR
101: DHSLSDAERI QREIAATSVQ AAFRGYLARR AFWALKGIIR LQALIRGHLV RRQAVATLFS VMGIVRLQAF ARGREIRKSD IGVQVYRKCR LQLLQGNKLA
201: NPTDAYLGIK KLTANAFAQK LLASSPKVLP VHAYDTSNPN SNLIWLENWS ASCFWKPVPQ PKKTISRKPQ NRLLVEAESA KPKKSVRKVP ASNFESSSVQ
301: TSFEFEKPKR SFRKVSSQSI EPPAVEDPQI ELEKVKRSLR KVHNPVVESS IQPQRSPRKE VEKPKLGVEK TRESSYPLVH ETAEEPVNVC DEKKKQEISE
401: QPEEEVHALE MEVHTPGPLE TNEALDSSLV NQIDSNEKAM VEEKPSMEKD TKEEKTPKPN NKENSAGKEN QKSRKKGSAT SKTEREESNG HHETSPSIPS
501: YMQATKSAKA KLRLQGSPKS AEQDGTEKAT VPRRHSLPSP GNGRITSHSP RTTRLANSGD KTGNKKEKPL LSSREGNAKT TPAERKR
Arabidopsis Description
IQD31Protein IQ-DOMAIN 31 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4D8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.