Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016536.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX83805 | Canola | cytosol, mitochondrion | 79.2 | 95.52 |
| CDY26720 | Canola | cytosol, mitochondrion | 67.76 | 80.85 |
| CDY19251 | Canola | cytosol, mitochondrion | 67.01 | 80.54 |
| AT1G18840.1 | Thale cress | cytosol | 63.0 | 74.13 |
| Solyc02g087760.2.1 | Tomato | nucleus | 29.42 | 35.61 |
| PGSC0003DMT400003322 | Potato | cytosol | 29.42 | 35.48 |
| CDX90650 | Canola | mitochondrion | 5.35 | 34.95 |
| CDY29016 | Canola | mitochondrion | 5.2 | 33.98 |
| CDY41676 | Canola | cytosol, plastid | 26.15 | 30.61 |
| CDY67405 | Canola | cytosol | 26.3 | 30.57 |
| CDY45197 | Canola | nucleus, plastid | 26.0 | 30.02 |
| CDY17427 | Canola | cytosol, plastid | 24.52 | 29.1 |
| CDY04137 | Canola | cytosol, plastid | 24.22 | 28.95 |
| CDY04138 | Canola | cytosol, plastid | 24.07 | 28.88 |
| CDY03037 | Canola | cytosol | 24.37 | 28.37 |
| CDX73724 | Canola | mitochondrion | 5.35 | 27.69 |
| CDX78003 | Canola | mitochondrion | 5.65 | 25.0 |
| CDY29768 | Canola | cytosol | 6.09 | 24.55 |
| CDY39317 | Canola | cytosol | 21.99 | 24.38 |
| CDY49085 | Canola | cytosol | 21.99 | 24.14 |
| CDY53440 | Canola | mitochondrion | 10.4 | 24.14 |
| CDY46537 | Canola | cytosol, mitochondrion | 10.4 | 24.14 |
| CDY50677 | Canola | nucleus | 12.04 | 22.01 |
| CDY36861 | Canola | nucleus | 11.89 | 21.39 |
| CDY43103 | Canola | cytosol | 11.59 | 21.2 |
| CDX98994 | Canola | mitochondrion | 11.14 | 21.19 |
| CDX70019 | Canola | cytosol, mitochondrion | 11.0 | 20.9 |
| CDX85648 | Canola | nucleus | 12.18 | 20.76 |
| CDY45643 | Canola | cytosol | 9.96 | 20.55 |
| CDX91120 | Canola | nucleus | 11.44 | 20.53 |
| CDX75883 | Canola | cytosol | 11.29 | 20.27 |
| CDX82400 | Canola | cytosol | 11.14 | 20.11 |
| CDY67178 | Canola | cytosol, mitochondrion | 11.59 | 20.1 |
| CDX78285 | Canola | plastid | 10.25 | 20.06 |
| CDY68636 | Canola | cytosol | 11.59 | 20.05 |
| CDX92076 | Canola | cytosol | 11.44 | 19.9 |
| CDY64325 | Canola | cytosol | 11.0 | 19.84 |
| CDX70505 | Canola | nucleus | 13.08 | 19.73 |
| CDX78523 | Canola | nucleus | 13.08 | 19.73 |
| CDY00253 | Canola | plastid | 11.29 | 19.29 |
| CDX86928 | Canola | mitochondrion, plastid | 11.14 | 19.04 |
| CDY00251 | Canola | plastid | 11.29 | 18.49 |
| CDX81042 | Canola | plastid | 10.4 | 18.09 |
| CDY30233 | Canola | mitochondrion | 10.1 | 17.53 |
| CDX98787 | Canola | mitochondrion | 7.58 | 17.23 |
| CDY41368 | Canola | mitochondrion, plastid | 10.7 | 17.14 |
| CDY47784 | Canola | mitochondrion | 9.81 | 17.01 |
| CDY41252 | Canola | cytosol, mitochondrion | 12.18 | 16.8 |
| CDY53133 | Canola | nucleus | 12.04 | 16.67 |
| CDY72577 | Canola | cytosol, mitochondrion | 7.13 | 16.55 |
| CDX94150 | Canola | nucleus | 11.0 | 15.95 |
| CDX76341 | Canola | mitochondrion, plastid | 9.81 | 15.71 |
| CDX70272 | Canola | cytosol, mitochondrion | 6.84 | 15.7 |
| CDX98786 | Canola | nucleus | 11.0 | 15.58 |
| CDY41423 | Canola | cytosol, mitochondrion | 6.69 | 15.36 |
| CDY41417 | Canola | mitochondrion | 6.69 | 15.05 |
| CDX83739 | Canola | nucleus | 14.86 | 13.53 |
| CDY62588 | Canola | nucleus | 14.86 | 13.5 |
| CDY14162 | Canola | endoplasmic reticulum | 6.69 | 13.43 |
| CDY04907 | Canola | endoplasmic reticulum | 6.69 | 13.43 |
| CDY44186 | Canola | nucleus, plastid | 14.56 | 13.41 |
| CDY29389 | Canola | nucleus, plastid | 14.86 | 13.37 |
| CDX75112 | Canola | cytosol | 1.04 | 5.04 |
Protein Annotations
| EnsemblPlants:CDX96693 | EnsemblPlantsGene:GSBRNA2T00102907001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:DUF4005 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | InterPro:P-loop_NTPase | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF14 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDX96693 | ProteinID:CDX96693.1 | SEG:seg | SMART:SM00015 |
| SUPFAM:SSF52540 | UniParc:UPI0002546F36 | MapMan:35.1 | : | : | : |
Description
BnaA08g22360D
Coordinates
chrLK031895:+:607410..611446
Molecular Weight (calculated)
74797.0 Da
IEP (calculated)
10.184
GRAVY (calculated)
-0.661
Length
673 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKTRADLHS RIRVTIQSVD SISKRIQRRR APVTDLKGFL QGFDKNVESK ARMSIPLSEF IQYRVRKRPQ LKRRIWSELL EETGFGSVDL RSGFIYFCKE
101: VWFCVLVVDI MGKPARWLKS VLLGKKSSKS SGSKDKERVV NGKEVVVVSR IEESDVVSDL PSFGNATVST SSAVVEETQN TEREVVSDDE IQLPESQVLP
201: TESPTAASVV VPDDLLSDSD KIQQEVAATT LQAAFRGYLA RRAFWALKGI IRLQALIRGH MVRRQAVATL CCVMGIVRLQ ALARGKEIRR SDIGVEVHRR
301: CLENKLPEDS VVETHTYLGI KKLTANAFAQ KLLASSPNVM PVHLDNDSSN SIWLENWSAS CFWKPVPQPK KTSVRKTQKK FEGDFAKPKK SVRKVPAPNL
401: DSSSAGAQTA FEFEKPKRSS FRKFSTSQSV ELPPLEEPPQ VDLEKVKRGL RKVHNPVVEN SIQPQPSPEK EIEKPALALK EPVTVSTFDE EEKETVVEIL
501: HTHGPLETNE AAPDSPLVNQ IEESQENVMA EEKEDVKEER TPKQKKSAGK ENKKSVKKDS PVSATTTTQA AECQESSNGN QSSTPGLPSY MQATKSAKAK
601: LRLQQGSSSP KQQGAEKVTR RYSLPSSGNN ARVTSDSPKT TRVSNSGGKT GKKTEKPLGR EGNGKTTQVE WKR
101: VWFCVLVVDI MGKPARWLKS VLLGKKSSKS SGSKDKERVV NGKEVVVVSR IEESDVVSDL PSFGNATVST SSAVVEETQN TEREVVSDDE IQLPESQVLP
201: TESPTAASVV VPDDLLSDSD KIQQEVAATT LQAAFRGYLA RRAFWALKGI IRLQALIRGH MVRRQAVATL CCVMGIVRLQ ALARGKEIRR SDIGVEVHRR
301: CLENKLPEDS VVETHTYLGI KKLTANAFAQ KLLASSPNVM PVHLDNDSSN SIWLENWSAS CFWKPVPQPK KTSVRKTQKK FEGDFAKPKK SVRKVPAPNL
401: DSSSAGAQTA FEFEKPKRSS FRKFSTSQSV ELPPLEEPPQ VDLEKVKRGL RKVHNPVVEN SIQPQPSPEK EIEKPALALK EPVTVSTFDE EEKETVVEIL
501: HTHGPLETNE AAPDSPLVNQ IEESQENVMA EEKEDVKEER TPKQKKSAGK ENKKSVKKDS PVSATTTTQA AECQESSNGN QSSTPGLPSY MQATKSAKAK
601: LRLQQGSSSP KQQGAEKVTR RYSLPSSGNN ARVTSDSPKT TRVSNSGGKT GKKTEKPLGR EGNGKTTQVE WKR
001: MGKPARWLKS VLLGKKPSKS SGSKDKERIV NGKEVVVISK IEESDVVSDL SSIGNAAVYT SGIVETQNLK HEDVSDDEIQ VSEVQPTDSQ DVASVPDDSL
101: SESEKIQQEI AAVTVQAAYR GYLARRAFKI LKGIIRLQAL IRGHMVRRQA VSTLCCVMGI VRLQALARGR EIRHSDIGVE VQRKCHLHHQ PLENKANSVV
201: DTHSYLGINK LTGNAFAQKL LASSPNVLPL SLDNDSSNSI WLENWSASCF WKPVPQPKKA SLRKSQKKFA SNPQIVEAEF ARPKKSVRKV PSSNLDNSSV
301: AQTSSELEKP KRSFRKVSTS QSVEPLPSMD NPQVDLEKVK RGLRKVHNPV VENSIQPQLV PQIAVEKPNG SLEESVNAFD EEKEDEVAET VVQQPEELIQ
401: THTPLGTNES LDSTLVNQIE ESEENVMAEE KEDVKEERTP KQNHKENSAG KENQKSGKKA SSVTATQTAE FQESGNGNQT SSPGIPSYMQ ATKSAKAKLR
501: LQGSSSPRQL GTTEKASRRY SLPSSGNSAK ITSHSPKTRV SNSSGKSGNK TEKTLLSSRE GNGKATPVEW KR
101: SESEKIQQEI AAVTVQAAYR GYLARRAFKI LKGIIRLQAL IRGHMVRRQA VSTLCCVMGI VRLQALARGR EIRHSDIGVE VQRKCHLHHQ PLENKANSVV
201: DTHSYLGINK LTGNAFAQKL LASSPNVLPL SLDNDSSNSI WLENWSASCF WKPVPQPKKA SLRKSQKKFA SNPQIVEAEF ARPKKSVRKV PSSNLDNSSV
301: AQTSSELEKP KRSFRKVSTS QSVEPLPSMD NPQVDLEKVK RGLRKVHNPV VENSIQPQLV PQIAVEKPNG SLEESVNAFD EEKEDEVAET VVQQPEELIQ
401: THTPLGTNES LDSTLVNQIE ESEENVMAEE KEDVKEERTP KQNHKENSAG KENQKSGKKA SSVTATQTAE FQESGNGNQT SSPGIPSYMQ ATKSAKAKLR
501: LQGSSSPRQL GTTEKASRRY SLPSSGNSAK ITSHSPKTRV SNSSGKSGNK TEKTLLSSRE GNGKATPVEW KR
Arabidopsis Description
IQD30At1g18840 [Source:UniProtKB/TrEMBL;Acc:Q501D2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.