Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 6
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036812.1-P | Field mustard | mitochondrion | 99.34 | 98.05 |
| CDX73724 | Canola | mitochondrion | 80.26 | 93.85 |
| CDX90650 | Canola | mitochondrion | 60.53 | 89.32 |
| CDY29016 | Canola | mitochondrion | 59.87 | 88.35 |
| AT3G51380.1 | Thale cress | mitochondrion | 57.89 | 85.44 |
| VIT_00s0684g00020.t01 | Wine grape | mitochondrion | 45.39 | 50.37 |
| PGSC0003DMT400009431 | Potato | mitochondrion | 41.45 | 48.09 |
| KRH07958 | Soybean | mitochondrion | 40.13 | 43.26 |
| GSMUA_Achr1P02670_001 | Banana | mitochondrion | 38.16 | 40.56 |
| GSMUA_Achr11P... | Banana | mitochondrion | 40.13 | 30.65 |
| CDY29768 | Canola | cytosol | 26.32 | 23.95 |
| Zm00001d048352_P001 | Maize | mitochondrion | 34.21 | 18.91 |
| OQU93295 | Sorghum | plastid | 34.87 | 18.73 |
| TraesCS5A01G502100.1 | Wheat | cytosol, plastid | 34.21 | 13.54 |
| CDX70019 | Canola | cytosol, mitochondrion | 30.92 | 13.28 |
| CDX98994 | Canola | mitochondrion | 30.92 | 13.28 |
| HORVU4Hr1G081190.1 | Barley | mitochondrion | 33.55 | 13.11 |
| CDY46537 | Canola | cytosol, mitochondrion | 25.0 | 13.1 |
| TraesCS4D01G327500.1 | Wheat | mitochondrion | 34.21 | 13.1 |
| CDY50677 | Canola | nucleus | 31.58 | 13.04 |
| TraesCS4B01G330700.1 | Wheat | mitochondrion | 33.55 | 12.88 |
| CDY36861 | Canola | nucleus | 31.58 | 12.83 |
| CDY53440 | Canola | mitochondrion | 24.34 | 12.76 |
| CDY45643 | Canola | cytosol | 26.97 | 12.58 |
| CDX78285 | Canola | plastid | 28.29 | 12.5 |
| CDY64325 | Canola | cytosol | 30.26 | 12.33 |
| CDY72577 | Canola | cytosol, mitochondrion | 23.03 | 12.07 |
| CDY00253 | Canola | plastid | 28.95 | 11.17 |
| CDX86928 | Canola | mitochondrion, plastid | 28.95 | 11.17 |
| CDX81042 | Canola | plastid | 28.29 | 11.11 |
| CDY43103 | Canola | cytosol | 26.32 | 10.87 |
| CDY67178 | Canola | cytosol, mitochondrion | 27.63 | 10.82 |
| CDX98787 | Canola | mitochondrion | 21.05 | 10.81 |
| CDY68636 | Canola | cytosol | 27.63 | 10.8 |
| CDY00251 | Canola | plastid | 28.95 | 10.71 |
| CDX70272 | Canola | cytosol, mitochondrion | 20.39 | 10.58 |
| CDY41423 | Canola | cytosol, mitochondrion | 20.39 | 10.58 |
| CDX94150 | Canola | nucleus | 32.24 | 10.56 |
| CDY41368 | Canola | mitochondrion, plastid | 28.95 | 10.48 |
| CDX82400 | Canola | cytosol | 25.66 | 10.46 |
| CDY04907 | Canola | endoplasmic reticulum | 23.03 | 10.45 |
| CDY14162 | Canola | endoplasmic reticulum | 23.03 | 10.45 |
| CDX75883 | Canola | cytosol | 25.66 | 10.4 |
| CDX92076 | Canola | cytosol | 26.32 | 10.34 |
| CDX98786 | Canola | nucleus | 32.24 | 10.32 |
| CDY53133 | Canola | nucleus | 32.89 | 10.29 |
| CDY41252 | Canola | cytosol, mitochondrion | 32.89 | 10.25 |
| CDX76341 | Canola | mitochondrion, plastid | 28.29 | 10.24 |
| CDX85648 | Canola | nucleus | 26.32 | 10.13 |
| CDY30233 | Canola | mitochondrion | 25.66 | 10.05 |
| CDY47784 | Canola | mitochondrion | 25.0 | 9.79 |
| CDX91120 | Canola | nucleus | 23.68 | 9.6 |
| CDX78523 | Canola | nucleus | 26.97 | 9.19 |
| CDX70505 | Canola | nucleus | 26.97 | 9.19 |
| CDY41417 | Canola | mitochondrion | 17.76 | 9.03 |
| CDX83805 | Canola | cytosol, mitochondrion | 25.0 | 6.81 |
| CDY19251 | Canola | cytosol, mitochondrion | 24.34 | 6.61 |
| CDY26720 | Canola | cytosol, mitochondrion | 24.34 | 6.56 |
| CDY03037 | Canola | cytosol | 24.34 | 6.4 |
| CDY45197 | Canola | nucleus, plastid | 24.34 | 6.35 |
| CDY41676 | Canola | cytosol, plastid | 23.68 | 6.26 |
| CDY67405 | Canola | cytosol | 23.68 | 6.22 |
| CDY39317 | Canola | cytosol | 24.34 | 6.1 |
| CDY49085 | Canola | cytosol | 23.68 | 5.87 |
| CDX96693 | Canola | nucleus | 25.0 | 5.65 |
| CDY04138 | Canola | cytosol, plastid | 19.74 | 5.35 |
| CDY04137 | Canola | cytosol, plastid | 19.74 | 5.33 |
| CDY17427 | Canola | cytosol, plastid | 19.74 | 5.29 |
| CDY44186 | Canola | nucleus, plastid | 22.37 | 4.65 |
| CDY29389 | Canola | nucleus, plastid | 22.37 | 4.55 |
| CDX83739 | Canola | nucleus | 21.71 | 4.47 |
| CDY62588 | Canola | nucleus | 21.71 | 4.45 |
| CDX75112 | Canola | cytosol | 1.32 | 1.44 |
| Os05t0100008-00 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX78003 | EnsemblPlantsGene:GSBRNA2T00129274001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | InterPro:P-loop_NTPase | PANTHER:PTHR32295 | PFAM:PF00612 | PFscan:PS50096 |
| ProteinID:CDX78003 | ProteinID:CDX78003.1 | SEG:seg | SMART:SM00015 | SUPFAM:SSF52540 | UniParc:UPI0004EE887C |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA09g31980D
Coordinates
chrLK031814:-:509296..513528
Molecular Weight (calculated)
17364.4 Da
IEP (calculated)
12.416
GRAVY (calculated)
-0.473
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MANSKRLFGV VRRKLLSRSP SSITTIRSSI PETTKEHIAA IKIQAYFRGH LARRAFRALR SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRARRS
101: TRNKERREST EILTRLNQIT KRVVRGVVRE DLSEPGQYQR GLSSGADSKE DI
101: TRNKERREST EILTRLNQIT KRVVRGVVRE DLSEPGQYQR GLSSGADSKE DI
001: MANSKRLFGV VRRKLLRRSQ SRITIIRSSA PETTREEIAA VKIQAFFRGH LARRAFKALK SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRARQL
101: LSH
101: LSH
Arabidopsis Description
IQD20At3g51380 [Source:UniProtKB/TrEMBL;Acc:Q9SD11]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.