Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022163.1-P | Field mustard | cytosol | 99.48 | 99.48 |
| CDY43103 | Canola | cytosol | 91.47 | 96.2 |
| AT3G16490.1 | Thale cress | cytosol | 87.34 | 86.89 |
| CDY68636 | Canola | cytosol | 87.08 | 86.63 |
| CDX75883 | Canola | cytosol | 82.43 | 85.07 |
| CDY67178 | Canola | cytosol, mitochondrion | 84.75 | 84.54 |
| CDX82400 | Canola | cytosol | 79.84 | 82.84 |
| VIT_09s0002g03360.t01 | Wine grape | cytosol, mitochondrion | 56.59 | 54.48 |
| Solyc06g066430.2.1 | Tomato | nucleus | 54.52 | 53.83 |
| KRH47199 | Soybean | cytosol | 54.26 | 53.03 |
| CDY46537 | Canola | cytosol, mitochondrion | 39.02 | 52.07 |
| CDY53440 | Canola | mitochondrion | 38.76 | 51.72 |
| KRH44268 | Soybean | cytosol | 53.23 | 51.24 |
| PGSC0003DMT400042595 | Potato | nucleus | 18.6 | 47.37 |
| CDY45643 | Canola | cytosol | 39.79 | 47.24 |
| TraesCS1D01G123800.1 | Wheat | cytosol | 47.55 | 40.53 |
| TraesCS1B01G142100.1 | Wheat | cytosol | 47.55 | 40.53 |
| GSMUA_Achr10P... | Banana | cytosol | 45.99 | 40.36 |
| TraesCS1A01G122900.1 | Wheat | cytosol, plastid | 47.29 | 40.31 |
| GSMUA_Achr6P14870_001 | Banana | cytosol, mitochondrion | 39.02 | 40.27 |
| CDY30233 | Canola | mitochondrion | 40.05 | 39.95 |
| CDX90650 | Canola | mitochondrion | 10.59 | 39.81 |
| Os05t0187500-01 | Rice | cytosol | 47.8 | 39.36 |
| TraesCS3D01G109900.1 | Wheat | cytosol, mitochondrion | 46.77 | 39.26 |
| CDY47784 | Canola | mitochondrion | 39.28 | 39.18 |
| TraesCS3B01G127100.1 | Wheat | cytosol | 46.77 | 39.09 |
| Os01t0190500-01 | Rice | cytosol, mitochondrion | 46.77 | 38.92 |
| CDY29016 | Canola | mitochondrion | 10.34 | 38.84 |
| TraesCS3A01G108100.1 | Wheat | cytosol, mitochondrion | 46.77 | 38.76 |
| GSMUA_Achr5P06520_001 | Banana | cytosol, mitochondrion | 40.57 | 38.67 |
| Zm00001d037688_P001 | Maize | mitochondrion | 45.99 | 38.53 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 36.43 | 38.21 |
| GSMUA_Achr3P17570_001 | Banana | cytosol, mitochondrion | 39.79 | 38.12 |
| EES02320 | Sorghum | mitochondrion | 47.03 | 37.92 |
| GSMUA_Achr7P13670_001 | Banana | cytosol, mitochondrion | 36.69 | 37.67 |
| Zm00001d010366_P001 | Maize | cytosol, mitochondrion | 45.48 | 37.53 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.69 | 37.47 |
| KXG21487 | Sorghum | cytosol, mitochondrion | 46.25 | 36.31 |
| Zm00001d039510_P001 | Maize | cytosol, mitochondrion | 44.7 | 35.97 |
| Zm00001d008819_P001 | Maize | mitochondrion | 42.89 | 35.62 |
| GSMUA_Achr8P20170_001 | Banana | cytosol, mitochondrion | 36.18 | 35.0 |
| HORVU1Hr1G028250.6 | Barley | mitochondrion | 47.55 | 34.91 |
| CDX78285 | Canola | plastid | 28.68 | 32.27 |
| CDX70019 | Canola | cytosol, mitochondrion | 28.68 | 31.36 |
| CDX98994 | Canola | mitochondrion | 28.68 | 31.36 |
| HORVU3Hr1G019630.3 | Barley | endoplasmic reticulum, plastid | 45.99 | 31.06 |
| CDY29768 | Canola | cytosol | 13.18 | 30.54 |
| CDX73724 | Canola | mitochondrion | 10.08 | 30.0 |
| CDY00253 | Canola | plastid | 30.23 | 29.7 |
| CDX86928 | Canola | mitochondrion, plastid | 29.97 | 29.44 |
| CDX81042 | Canola | plastid | 28.68 | 28.68 |
| CDY00251 | Canola | plastid | 30.23 | 28.47 |
| CDY53133 | Canola | nucleus | 34.11 | 27.16 |
| CDY41252 | Canola | cytosol, mitochondrion | 34.11 | 27.05 |
| CDY50677 | Canola | nucleus | 25.58 | 26.9 |
| CDY36861 | Canola | nucleus | 25.58 | 26.47 |
| CDX98786 | Canola | nucleus | 32.3 | 26.32 |
| CDX78003 | Canola | mitochondrion | 10.34 | 26.32 |
| CDY41368 | Canola | mitochondrion, plastid | 28.17 | 25.95 |
| CDX94150 | Canola | nucleus | 30.75 | 25.65 |
| CDX70272 | Canola | cytosol, mitochondrion | 19.38 | 25.6 |
| CDY41423 | Canola | cytosol, mitochondrion | 19.38 | 25.6 |
| CDX98787 | Canola | mitochondrion | 19.38 | 25.34 |
| CDX76341 | Canola | mitochondrion, plastid | 27.13 | 25.0 |
| CDY64325 | Canola | cytosol | 23.77 | 24.66 |
| CDY72577 | Canola | cytosol, mitochondrion | 17.83 | 23.79 |
| CDY04907 | Canola | endoplasmic reticulum | 20.16 | 23.28 |
| CDY14162 | Canola | endoplasmic reticulum | 20.16 | 23.28 |
| CDY41417 | Canola | mitochondrion | 15.25 | 19.73 |
| CDX91120 | Canola | nucleus | 18.86 | 19.47 |
| CDX85648 | Canola | nucleus | 19.64 | 19.24 |
| CDX78523 | Canola | nucleus | 19.9 | 17.26 |
| CDX70505 | Canola | nucleus | 19.9 | 17.26 |
| CDX83805 | Canola | cytosol, mitochondrion | 20.16 | 13.98 |
| CDY19251 | Canola | cytosol, mitochondrion | 19.64 | 13.57 |
| CDY26720 | Canola | cytosol, mitochondrion | 19.12 | 13.12 |
| CDX96693 | Canola | nucleus | 19.9 | 11.44 |
| CDY03037 | Canola | cytosol | 16.8 | 11.25 |
| CDY04137 | Canola | cytosol, plastid | 16.28 | 11.19 |
| CDY17427 | Canola | cytosol, plastid | 16.28 | 11.11 |
| CDY67405 | Canola | cytosol | 16.54 | 11.05 |
| CDY04138 | Canola | cytosol, plastid | 16.02 | 11.05 |
| CDY45197 | Canola | nucleus, plastid | 16.54 | 10.98 |
| CDY41676 | Canola | cytosol, plastid | 16.28 | 10.96 |
| CDY49085 | Canola | cytosol | 15.76 | 9.95 |
| CDY44186 | Canola | nucleus, plastid | 17.83 | 9.44 |
| CDY39317 | Canola | cytosol | 14.47 | 9.23 |
| CDX83739 | Canola | nucleus | 17.31 | 9.07 |
| CDY29389 | Canola | nucleus, plastid | 17.31 | 8.96 |
| CDY62588 | Canola | nucleus | 16.8 | 8.77 |
| CDX75112 | Canola | cytosol | 3.1 | 8.63 |
Protein Annotations
| Gene3D:1.20.5.190 | MapMan:35.2 | EnsemblPlants:CDX92076 | ProteinID:CDX92076 | ProteinID:CDX92076.1 | InterPro:DUF4005 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00153759001 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS |
| InterPro:P-loop_NTPase | PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF10 |
| SMART:SM00015 | SUPFAM:SSF52540 | UniParc:UPI0004EDCA1D | SEG:seg | : | : |
Description
BnaA05g23310D
Coordinates
chrLK031871:-:51771..53477
Molecular Weight (calculated)
43614.9 Da
IEP (calculated)
10.706
GRAVY (calculated)
-0.685
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAVRWFKG IFGMKNSKEK EYRVSGDGRG EAGESLIHRK ILQADNVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNAKTGGR
101: SGGNVVYGTT MERWAAVKIQ SVFKGYLARK ALRALKGLVK LQALVRGYLV RKRAAETLYS MQALIRAQTS VRSQRINRNN MLHPRHSLER FDDSRSEIHS
201: KRMSISVEKH INNNTYDETS PKIVEIDTYK TKSRSRRMNV AVSECGDEDF EWSFRGEKCK FPTAQNTPRF SSSAAMNNNY YYTPPSPAKS VCRDACYKPS
301: YPGLMTPSYM ANTQSFRAKA RSHSAPRQRP DRKRLSLDEI MAARSSVSGV RMVQPQPQLL QQQQEKRSSC NYDRQFPQEP AGFRFYN
101: SGGNVVYGTT MERWAAVKIQ SVFKGYLARK ALRALKGLVK LQALVRGYLV RKRAAETLYS MQALIRAQTS VRSQRINRNN MLHPRHSLER FDDSRSEIHS
201: KRMSISVEKH INNNTYDETS PKIVEIDTYK TKSRSRRMNV AVSECGDEDF EWSFRGEKCK FPTAQNTPRF SSSAAMNNNY YYTPPSPAKS VCRDACYKPS
301: YPGLMTPSYM ANTQSFRAKA RSHSAPRQRP DRKRLSLDEI MAARSSVSGV RMVQPQPQLL QQQQEKRSSC NYDRQFPQEP AGFRFYN
001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN
Arabidopsis Description
IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.