Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04137 | Canola | cytosol, plastid | 98.93 | 98.58 |
| Bra017409.1-P | Field mustard | cytosol, plastid | 95.72 | 95.04 |
| CDY17427 | Canola | cytosol, plastid | 93.58 | 92.59 |
| CDY41676 | Canola | cytosol, plastid | 80.39 | 78.43 |
| CDY67405 | Canola | cytosol | 80.93 | 78.41 |
| CDY45197 | Canola | nucleus, plastid | 81.11 | 78.04 |
| CDY03037 | Canola | cytosol | 79.86 | 77.51 |
| AT2G02790.1 | Thale cress | cytosol | 78.25 | 69.03 |
| CDY39317 | Canola | cytosol | 52.41 | 48.43 |
| CDY49085 | Canola | cytosol | 51.87 | 47.47 |
| Os05t0535900-01 | Rice | cytosol | 33.51 | 32.75 |
| PGSC0003DMT400045444 | Potato | cytosol, plastid | 32.26 | 32.55 |
| Solyc05g007130.2.1 | Tomato | cytosol, plastid | 31.91 | 32.49 |
| KXG22418 | Sorghum | cytosol, plastid | 33.16 | 32.12 |
| Zm00001d011138_P003 | Maize | cytosol, plastid | 33.33 | 31.64 |
| KRH74806 | Soybean | cytosol, plastid | 31.73 | 31.62 |
| Zm00001d038838_P001 | Maize | mitochondrion | 32.26 | 31.53 |
| GSMUA_Achr8P26180_001 | Banana | mitochondrion | 29.41 | 31.43 |
| KRH69321 | Soybean | cytosol, mitochondrion | 31.19 | 31.08 |
| KXG33252 | Sorghum | cytosol | 30.48 | 30.59 |
| KRG99144 | Soybean | cytosol, plastid | 29.77 | 30.53 |
| TraesCS1A01G357500.3 | Wheat | cytosol, mitochondrion, plastid | 31.37 | 30.4 |
| TraesCS1B01G374100.2 | Wheat | cytosol, mitochondrion | 31.02 | 30.05 |
| TraesCS1D01G361800.3 | Wheat | cytosol, mitochondrion, plastid | 30.84 | 29.88 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 26.92 | 29.84 |
| HORVU1Hr1G080360.4 | Barley | mitochondrion | 31.02 | 29.54 |
| KRH45861 | Soybean | plastid | 28.7 | 29.43 |
| TraesCS3B01G276000.1 | Wheat | cytosol, plastid | 28.52 | 29.2 |
| Zm00001d043655_P002 | Maize | mitochondrion | 29.77 | 29.04 |
| TraesCS3A01G244100.1 | Wheat | cytosol, plastid | 28.34 | 29.01 |
| TraesCS3D01G247300.1 | Wheat | cytosol, plastid | 28.16 | 28.83 |
| Os01t0716200-01 | Rice | nucleus | 29.23 | 28.57 |
| CDX83805 | Canola | cytosol, mitochondrion | 28.34 | 28.49 |
| CDY26720 | Canola | cytosol, mitochondrion | 28.16 | 28.01 |
| HORVU3Hr1G067750.8 | Barley | cytosol, plastid | 27.45 | 27.7 |
| CDY19251 | Canola | cytosol, mitochondrion | 27.45 | 27.5 |
| CDY29016 | Canola | mitochondrion | 4.99 | 27.18 |
| CDX90650 | Canola | mitochondrion | 4.99 | 27.18 |
| CDX96693 | Canola | nucleus | 28.88 | 24.07 |
| CDX73724 | Canola | mitochondrion | 5.17 | 22.31 |
| CDY50677 | Canola | nucleus | 13.55 | 20.65 |
| CDY29768 | Canola | cytosol | 6.06 | 20.36 |
| CDY36861 | Canola | nucleus | 13.37 | 20.05 |
| CDY46537 | Canola | cytosol, mitochondrion | 10.34 | 20.0 |
| CDX78003 | Canola | mitochondrion | 5.35 | 19.74 |
| CDY53440 | Canola | mitochondrion | 10.16 | 19.66 |
| CDX98994 | Canola | mitochondrion | 12.12 | 19.21 |
| CDX70019 | Canola | cytosol, mitochondrion | 11.94 | 18.93 |
| CDX78285 | Canola | plastid | 11.23 | 18.31 |
| CDY64325 | Canola | cytosol | 11.94 | 17.96 |
| CDY45643 | Canola | cytosol | 10.34 | 17.79 |
| CDX85648 | Canola | nucleus | 12.12 | 17.22 |
| CDY43103 | Canola | cytosol | 11.05 | 16.85 |
| CDY68636 | Canola | cytosol | 11.59 | 16.71 |
| CDX98787 | Canola | mitochondrion | 8.73 | 16.55 |
| CDX75883 | Canola | cytosol | 11.05 | 16.53 |
| CDX91120 | Canola | nucleus | 11.05 | 16.53 |
| CDX70505 | Canola | nucleus | 13.01 | 16.37 |
| CDX82400 | Canola | cytosol | 10.87 | 16.35 |
| CDX81042 | Canola | plastid | 11.23 | 16.28 |
| CDY67178 | Canola | cytosol, mitochondrion | 11.23 | 16.24 |
| CDX78523 | Canola | nucleus | 12.83 | 16.14 |
| CDX92076 | Canola | cytosol | 11.05 | 16.02 |
| CDY00253 | Canola | plastid | 11.05 | 15.74 |
| CDX86928 | Canola | mitochondrion, plastid | 11.05 | 15.74 |
| CDY30233 | Canola | mitochondrion | 10.52 | 15.21 |
| CDY00251 | Canola | plastid | 11.05 | 15.09 |
| CDY41417 | Canola | mitochondrion | 8.02 | 15.05 |
| CDX83739 | Canola | nucleus | 19.43 | 14.75 |
| CDY47784 | Canola | mitochondrion | 10.16 | 14.69 |
| CDY72577 | Canola | cytosol, mitochondrion | 7.49 | 14.48 |
| CDY53133 | Canola | nucleus | 12.3 | 14.2 |
| CDY62588 | Canola | nucleus | 18.72 | 14.17 |
| CDY44186 | Canola | nucleus, plastid | 18.36 | 14.09 |
| CDX76341 | Canola | mitochondrion, plastid | 10.52 | 14.05 |
| CDY41252 | Canola | cytosol, mitochondrion | 12.12 | 13.93 |
| CDY41368 | Canola | mitochondrion, plastid | 10.34 | 13.81 |
| CDX98786 | Canola | nucleus | 11.41 | 13.47 |
| CDY29389 | Canola | nucleus, plastid | 17.83 | 13.37 |
| CDX94150 | Canola | nucleus | 11.05 | 13.36 |
| CDY41423 | Canola | cytosol, mitochondrion | 6.24 | 11.95 |
| CDX70272 | Canola | cytosol, mitochondrion | 6.24 | 11.95 |
| CDY14162 | Canola | endoplasmic reticulum | 6.42 | 10.75 |
| CDY04907 | Canola | endoplasmic reticulum | 6.42 | 10.75 |
| CDX75112 | Canola | cytosol | 1.43 | 5.76 |
Protein Annotations
| EnsemblPlants:CDY04138 | EnsemblPlantsGene:GSBRNA2T00117803001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:DUF4005 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | ncoils:Coil | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF48 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDY04138 | ProteinID:CDY04138.1 | SEG:seg | UniParc:UPI0004EE1D34 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA09g19160D
Coordinates
chrLK031949:+:412989..415709
Molecular Weight (calculated)
61167.3 Da
IEP (calculated)
10.460
GRAVY (calculated)
-0.866
Length
561 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKTPSPGKW IKSLLRKKSS KSTLDKGTDK LRSAKKEELV VKVKDNNNVS NLPTNPSPVV SSQEVAATQP VLVPDVVVLE NQPKRDGTNV NPESVNDTEE
101: LKVEEDATKD REEFQMLKGV IKLQAVIRGH LVRRQAVATY SCIWGIVKFQ ALVRGKIARS SETVVQLQKS NPQTLQGSTY SWLEGSTKLS MIDKLLVSSP
201: TVSPLKIQYG PEDPNSAKVW LERWTQLPVW SPGPLVIKSL VPKSQTKKRS FQAVEADKGK LKRGIKKPPG GLNTGSGSSS SRSTAEKQSV RKASTLGKEV
301: SNDKPKQSSR KSTSAIKEGS SSLEVKDEKP RISLKKANGI EVKPTRKSAE KKKEIVASVQ KEVTGDKVSS SVVDTPEEEV KDSPETVSKE VDLDKDDKSP
401: VLGTPEQDEL KTEEKNDKAE EEIQEPDVQV SSENGNAASE NTKQSDRRAS LPAKIENHHQ DDGVTHSGRK IPSYMAPTAS AKARVRGGQG SPRFGGQEKP
501: EKNGITRRHS LPPGANGKLS AMSPRAHRLL IASAKGSMNS NRSFSSSKDI GDKSTKAEWK R
101: LKVEEDATKD REEFQMLKGV IKLQAVIRGH LVRRQAVATY SCIWGIVKFQ ALVRGKIARS SETVVQLQKS NPQTLQGSTY SWLEGSTKLS MIDKLLVSSP
201: TVSPLKIQYG PEDPNSAKVW LERWTQLPVW SPGPLVIKSL VPKSQTKKRS FQAVEADKGK LKRGIKKPPG GLNTGSGSSS SRSTAEKQSV RKASTLGKEV
301: SNDKPKQSSR KSTSAIKEGS SSLEVKDEKP RISLKKANGI EVKPTRKSAE KKKEIVASVQ KEVTGDKVSS SVVDTPEEEV KDSPETVSKE VDLDKDDKSP
401: VLGTPEQDEL KTEEKNDKAE EEIQEPDVQV SSENGNAASE NTKQSDRRAS LPAKIENHHQ DDGVTHSGRK IPSYMAPTAS AKARVRGGQG SPRFGGQEKP
501: EKNGITRRHS LPPGANGKLS AMSPRAHRLL IASAKGSMNS NRSFSSSKDI GDKSTKAEWK R
001: MGKTPSPGKW IKSLLGKKSS KSSLEKGGEK LRSAKKEELV VKVKDNNVSK LPTEPPVVSS QEVAATQTVV VPDVVIAEKQ LSGDIEGDES SNVNLESGND
101: SEEVKLEEAA TKVQAALRAQ QAREESQNLK GITRVQAVIR GHLVRRQAVA TYSCIWGIVK VQALVRGKKA RSSETVAQLQ KTNTETETSE TLQGSTYSWM
201: ENPTKLSMID KLLVSSPTTL PLKIQYSPED PNSAKVWLGR WTQLQVWAPG PLVVKNLVPK SQTKKRSFQA VEAEKGKLKR GVRKPTGVST TANSSTSRST
301: ADNEKPKRTV RKASTLGKEL SKIENDKSKQ SSRKSTSAIK EGSSVEVKDE KPRISHKKAS LSNGIGKATR KSAEKKKEIA DAVQKELPIE EVSVSLVDAP
401: EDEKMNLIPV TISKESDLDK DEKSLVLDKP EQDELRTAER DDKAEEELKT AERDDSAEEK IQEPDAQISS ENGNVASENT KPSDRRASLP AKIENHHQDD
501: GLTQSGRKIP SYMAPTASAK ARIRGQGSPR IAQEKPEKNG TTRRHSLPPA ANGKLSTMSP RAHRLLIASA KGSMNSDRSF SSSKDIGDKS TKAEWKR
101: SEEVKLEEAA TKVQAALRAQ QAREESQNLK GITRVQAVIR GHLVRRQAVA TYSCIWGIVK VQALVRGKKA RSSETVAQLQ KTNTETETSE TLQGSTYSWM
201: ENPTKLSMID KLLVSSPTTL PLKIQYSPED PNSAKVWLGR WTQLQVWAPG PLVVKNLVPK SQTKKRSFQA VEAEKGKLKR GVRKPTGVST TANSSTSRST
301: ADNEKPKRTV RKASTLGKEL SKIENDKSKQ SSRKSTSAIK EGSSVEVKDE KPRISHKKAS LSNGIGKATR KSAEKKKEIA DAVQKELPIE EVSVSLVDAP
401: EDEKMNLIPV TISKESDLDK DEKSLVLDKP EQDELRTAER DDKAEEELKT AERDDSAEEK IQEPDAQISS ENGNVASENT KPSDRRASLP AKIENHHQDD
501: GLTQSGRKIP SYMAPTASAK ARIRGQGSPR IAQEKPEKNG TTRRHSLPPA ANGKLSTMSP RAHRLLIASA KGSMNSDRSF SSSKDIGDKS TKAEWKR
Arabidopsis Description
IQD29IQ-domain 29 [Source:UniProtKB/TrEMBL;Acc:F4IRA9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.