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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 2
  • mitochondrion 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014304.1-P Field mustard cytosol, mitochondrion 95.17 95.17
CDY46537 Canola cytosol, mitochondrion 95.17 95.17
CDY45643 Canola cytosol 73.45 65.34
AT1G51960.1 Thale cress cytosol, mitochondrion 72.07 59.54
CDX75883 Canola cytosol 51.72 40.0
CDY43103 Canola cytosol 50.69 39.95
CDY68636 Canola cytosol 52.41 39.07
CDX82400 Canola cytosol 50.0 38.87
CDX92076 Canola cytosol 51.72 38.76
CDY67178 Canola cytosol, mitochondrion 51.03 38.14
CDX90650 Canola mitochondrion 12.76 35.92
VIT_09s0002g03360.t01 Wine grape cytosol, mitochondrion 48.62 35.07
CDY29016 Canola mitochondrion 12.41 34.95
Solyc06g066430.2.1 Tomato nucleus 46.55 34.44
KRH47199 Soybean cytosol 46.9 34.34
PGSC0003DMT400042595 Potato nucleus 17.93 34.21
KRH44268 Soybean cytosol 46.55 33.58
GSMUA_Achr6P14870_001 Banana cytosol, mitochondrion 38.62 29.87
CDY47784 Canola mitochondrion 38.97 29.12
CDY30233 Canola mitochondrion 38.62 28.87
CDY29768 Canola cytosol 16.21 28.14
GSMUA_Achr10P... Banana cytosol 42.41 27.89
CDX73724 Canola mitochondrion 12.41 27.69
GSMUA_Achr7P13670_001 Banana cytosol, mitochondrion 35.86 27.59
Os01t0190500-01 Rice cytosol, mitochondrion 44.14 27.53
TraesCS1D01G123800.1 Wheat cytosol 42.76 27.31
TraesCS1B01G142100.1 Wheat cytosol 42.76 27.31
TraesCS1A01G122900.1 Wheat cytosol, plastid 42.41 27.09
GSMUA_AchrUn_... Banana cytosol 35.17 26.91
GSMUA_Achr5P06520_001 Banana cytosol, mitochondrion 37.59 26.85
CDX78285 Canola plastid 31.72 26.74
TraesCS3D01G109900.1 Wheat cytosol, mitochondrion 42.41 26.68
Os05t0187500-01 Rice cytosol 43.1 26.6
GSMUA_Achr8P20170_001 Banana cytosol, mitochondrion 36.55 26.5
GSMUA_Achr3P17570_001 Banana cytosol, mitochondrion 36.9 26.49
TraesCS3B01G127100.1 Wheat cytosol 42.07 26.35
GSMUA_Achr10P... Banana cytosol, mitochondrion 33.1 26.02
TraesCS3A01G108100.1 Wheat cytosol, mitochondrion 41.72 25.91
Zm00001d037688_P001 Maize mitochondrion 41.03 25.76
CDX70019 Canola cytosol, mitochondrion 31.38 25.71
CDX98994 Canola mitochondrion 31.38 25.71
KXG21487 Sorghum cytosol, mitochondrion 41.72 24.54
CDX78003 Canola mitochondrion 12.76 24.34
Zm00001d010366_P001 Maize cytosol, mitochondrion 39.31 24.31
EES02320 Sorghum mitochondrion 40.0 24.17
Zm00001d008819_P001 Maize mitochondrion 38.62 24.03
CDY00253 Canola plastid 32.41 23.86
HORVU1Hr1G028250.6 Barley mitochondrion 43.1 23.72
CDX86928 Canola mitochondrion, plastid 32.07 23.6
CDX81042 Canola plastid 31.38 23.51
CDY50677 Canola nucleus 29.31 23.1
CDY00251 Canola plastid 32.41 22.87
Zm00001d039510_P001 Maize cytosol, mitochondrion 37.93 22.87
CDX70272 Canola cytosol, mitochondrion 22.76 22.53
CDY41423 Canola cytosol, mitochondrion 22.76 22.53
CDY36861 Canola nucleus 28.97 22.46
HORVU3Hr1G019630.3 Barley endoplasmic reticulum, plastid 42.41 21.47
CDY72577 Canola cytosol, mitochondrion 21.03 21.03
CDY64325 Canola cytosol 26.9 20.91
CDY04907 Canola endoplasmic reticulum 22.76 19.7
CDY14162 Canola endoplasmic reticulum 22.76 19.7
CDX85648 Canola nucleus 26.55 19.49
CDX91120 Canola nucleus 24.48 18.93
CDX94150 Canola nucleus 30.0 18.75
CDY41368 Canola mitochondrion, plastid 26.9 18.57
CDY41252 Canola cytosol, mitochondrion 31.03 18.44
CDY53133 Canola nucleus 30.69 18.31
CDX98786 Canola nucleus 29.31 17.89
CDX76341 Canola mitochondrion, plastid 25.52 17.62
CDX78523 Canola nucleus 26.9 17.49
CDY41417 Canola mitochondrion 17.93 17.39
CDX70505 Canola nucleus 26.55 17.26
CDX98787 Canola mitochondrion 17.24 16.89
CDX83805 Canola cytosol, mitochondrion 24.14 12.54
CDY19251 Canola cytosol, mitochondrion 23.45 12.14
CDY26720 Canola cytosol, mitochondrion 23.1 11.88
CDY41676 Canola cytosol, plastid 22.41 11.3
CDY67405 Canola cytosol 22.41 11.23
CDY45197 Canola nucleus, plastid 21.38 10.63
CDY03037 Canola cytosol 21.03 10.55
CDX96693 Canola nucleus 24.14 10.4
CDY04137 Canola cytosol, plastid 20.0 10.3
CDY04138 Canola cytosol, plastid 19.66 10.16
CDY17427 Canola cytosol, plastid 19.31 9.88
CDY49085 Canola cytosol 19.66 9.3
CDY39317 Canola cytosol 19.31 9.23
CDY44186 Canola nucleus, plastid 23.1 9.17
CDX83739 Canola nucleus 23.1 9.07
CDY62588 Canola nucleus 22.41 8.77
CDY29389 Canola nucleus, plastid 22.41 8.69
CDX75112 Canola cytosol 0.69 1.44
Protein Annotations
EnsemblPlants:CDY53440EnsemblPlantsGene:GSBRNA2T00010697001Gene3D:1.20.5.190GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:DUF4005InterPro:IPR000048InterPro:IQ_motif_EF-hand-BSInterPro:P-loop_NTPasePANTHER:PTHR32295PANTHER:PTHR32295:SF10
PFAM:PF00612PFAM:PF13178PFscan:PS50096ProteinID:CDY53440ProteinID:CDY53440.1SEG:seg
SMART:SM00015SUPFAM:SSF52540UniParc:UPI0004EE5B74UniProt:A0A078IQT2MapMan:35.2:
Description
BnaC03g78010DBnaC03g78010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQT2]
Coordinates
chrLK033203:+:36422..37505
Molecular Weight (calculated)
32914.4 Da
IEP (calculated)
10.958
GRAVY (calculated)
-0.703
Length
290 amino acids
Sequence
(BLAST)
001: MGRATRWFKR LFGTKKSLVS DSEKEQNEQA FAVATTTATT EEAAVSAAKA AESVVTGDII TRDERWAAVK IQKVFRGSLA RKALRALKGI VKLQALVRGY
101: LVRKRAAVML HNMQTLVRVQ TVMRSKRNRR LHKEYNDMFQ PRHSLAEVAA GDAFKRRSKS RKKHDVDSMS EHEDGFAYQR NDLELNLPKE KWKFARTPRL
201: SSSLHNHSAN NRYYVMQSPG KSVCGNATCE YGMSTPGYME KTQSFKAKVR SHSAPHQRSE RIRLSLDEVI ASRSSVSGES LQQQLRYSCS
Best Arabidopsis Sequence Match ( AT1G51960.1 )
(BLAST)
001: MGRAARWFKG MFGTKKSKDR SHVSGGDSVK GGDHSGDFNV PRDSVLLGTI LTDTEKDQNK NAIAVATATA TAADAAVSAA VVRLTSEGRA GDIIITKEER
101: WAAVKIQKVF RGSLARKALR ALKGIVKLQA LVRGYLVRKR AAAMLQSIQT LIRVQTAMRS KRINRSLNKE YNNMFQPRQS FDKFDEATFD DRRTKIVEKD
201: DRYMRRSSSR SRSRQVHNVV SMSDYEGDFV YKGNDLELCF SDEKWKFATA QNTPRLLHHH SANNRYYVMQ SPAKSVGGKA LCDYESSVST PGYMEKTKSF
301: KAKVRSHSAP RQRSERQRLS LDEVMASKSS VSGVSMSHQH PPRHSCSCDP L
Arabidopsis Description
IQD27Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU28]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.