Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50677 | Canola | nucleus | 95.45 | 97.01 |
| Bra039715.1-P | Field mustard | nucleus, plastid | 95.45 | 96.49 |
| CDY29768 | Canola | cytosol | 34.76 | 77.84 |
| CDY64325 | Canola | cytosol | 77.27 | 77.48 |
| AT4G14750.3 | Thale cress | cytosol | 87.43 | 71.09 |
| GSMUA_Achr3P14930_001 | Banana | cytosol | 50.0 | 49.34 |
| GSMUA_Achr8P26800_001 | Banana | cytosol | 47.33 | 47.33 |
| CDX90650 | Canola | mitochondrion | 12.3 | 44.66 |
| CDY29016 | Canola | mitochondrion | 12.03 | 43.69 |
| TraesCS5A01G377500.1 | Wheat | cytosol | 45.99 | 37.23 |
| TraesCS5B01G381100.1 | Wheat | cytosol, mitochondrion | 45.72 | 37.01 |
| TraesCS5D01G387500.1 | Wheat | cytosol | 45.45 | 36.72 |
| HORVU5Hr1G093430.4 | Barley | cytosol | 45.72 | 36.54 |
| Zm00001d033280_P001 | Maize | cytosol, mitochondrion | 45.19 | 35.73 |
| Os03t0636700-00 | Rice | mitochondrion | 41.98 | 35.12 |
| CDX73724 | Canola | mitochondrion | 12.03 | 34.62 |
| EER93770 | Sorghum | cytosol, mitochondrion | 44.65 | 34.08 |
| CDX78003 | Canola | mitochondrion | 12.83 | 31.58 |
| TraesCSU01G074100.1 | Wheat | cytosol, mitochondrion | 32.35 | 30.4 |
| TraesCS5A01G055100.1 | Wheat | cytosol, mitochondrion | 32.35 | 30.1 |
| Os12t0604500-00 | Rice | cytosol | 35.29 | 29.6 |
| VIT_14s0030g01880.t01 | Wine grape | nucleus | 30.75 | 29.41 |
| CDY53440 | Canola | mitochondrion | 22.46 | 28.97 |
| CDY46537 | Canola | cytosol, mitochondrion | 22.46 | 28.97 |
| KRH68719 | Soybean | cytosol | 28.88 | 28.88 |
| KRG96957 | Soybean | cytosol | 28.07 | 28.38 |
| Zm00001d041437_P001 | Maize | cytosol, mitochondrion | 33.42 | 28.22 |
| CDY45643 | Canola | cytosol | 24.33 | 27.91 |
| CDX78285 | Canola | plastid | 25.4 | 27.62 |
| CDX82400 | Canola | cytosol | 26.2 | 26.27 |
| OQU79535 | Sorghum | cytosol, mitochondrion | 32.09 | 25.92 |
| CDX75883 | Canola | cytosol | 25.94 | 25.87 |
| CDY43103 | Canola | cytosol | 25.4 | 25.82 |
| CDY68636 | Canola | cytosol | 26.74 | 25.71 |
| CDX92076 | Canola | cytosol | 26.47 | 25.58 |
| CDY67178 | Canola | cytosol, mitochondrion | 26.47 | 25.52 |
| CDX98994 | Canola | mitochondrion | 24.06 | 25.42 |
| CDX70019 | Canola | cytosol, mitochondrion | 24.06 | 25.42 |
| CDY47784 | Canola | mitochondrion | 25.4 | 24.48 |
| CDX81042 | Canola | plastid | 25.13 | 24.29 |
| CDY30233 | Canola | mitochondrion | 25.13 | 24.23 |
| CDY00253 | Canola | plastid | 25.13 | 23.86 |
| CDX86928 | Canola | mitochondrion, plastid | 24.87 | 23.6 |
| CDY00251 | Canola | plastid | 25.13 | 22.87 |
| CDX98787 | Canola | mitochondrion | 17.65 | 22.3 |
| CDY41368 | Canola | mitochondrion, plastid | 24.87 | 22.14 |
| CDY41252 | Canola | cytosol, mitochondrion | 28.34 | 21.72 |
| CDX76341 | Canola | mitochondrion, plastid | 24.33 | 21.67 |
| CDY53133 | Canola | nucleus | 28.07 | 21.6 |
| CDX98786 | Canola | nucleus | 27.27 | 21.47 |
| CDX94150 | Canola | nucleus | 26.2 | 21.12 |
| CDX85648 | Canola | nucleus | 20.05 | 18.99 |
| CDY72577 | Canola | cytosol, mitochondrion | 14.71 | 18.97 |
| CDX70272 | Canola | cytosol, mitochondrion | 14.17 | 18.09 |
| CDX91120 | Canola | nucleus | 17.91 | 17.87 |
| CDY41423 | Canola | cytosol, mitochondrion | 13.9 | 17.75 |
| CDX78523 | Canola | nucleus | 20.86 | 17.49 |
| CDX70505 | Canola | nucleus | 20.59 | 17.26 |
| CDY14162 | Canola | endoplasmic reticulum | 14.71 | 16.42 |
| CDY04907 | Canola | endoplasmic reticulum | 14.71 | 16.42 |
| CDY41417 | Canola | mitochondrion | 12.57 | 15.72 |
| CDY41676 | Canola | cytosol, plastid | 23.26 | 15.13 |
| CDY67405 | Canola | cytosol | 22.99 | 14.85 |
| CDY03037 | Canola | cytosol | 22.73 | 14.71 |
| CDX83805 | Canola | cytosol, mitochondrion | 21.12 | 14.16 |
| CDY45197 | Canola | nucleus, plastid | 21.93 | 14.07 |
| CDY19251 | Canola | cytosol, mitochondrion | 20.86 | 13.93 |
| CDY17427 | Canola | cytosol, plastid | 20.86 | 13.76 |
| CDY04137 | Canola | cytosol, plastid | 20.59 | 13.68 |
| CDY26720 | Canola | cytosol, mitochondrion | 20.59 | 13.65 |
| CDY04138 | Canola | cytosol, plastid | 20.05 | 13.37 |
| CDX75112 | Canola | cytosol | 4.55 | 12.23 |
| CDX96693 | Canola | nucleus | 21.39 | 11.89 |
| CDY49085 | Canola | cytosol | 19.25 | 11.75 |
| CDY39317 | Canola | cytosol | 18.98 | 11.7 |
| CDX83739 | Canola | nucleus | 20.32 | 10.28 |
| CDY62588 | Canola | nucleus | 20.05 | 10.12 |
| CDY44186 | Canola | nucleus, plastid | 19.25 | 9.85 |
| CDY29389 | Canola | nucleus, plastid | 18.72 | 9.36 |
Protein Annotations
| Gene3D:1.20.5.190 | MapMan:35.2 | UniProt:A0A078HGH4 | EnsemblPlants:CDY36861 | ProteinID:CDY36861 | ProteinID:CDY36861.1 |
| InterPro:DUF4005 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00062926001 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF45 |
| SMART:SM00015 | UniParc:UPI0004EB9C80 | SEG:seg | : | : | : |
Description
BnaC08g09860DBnaC08g09860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGH4]
Coordinates
chrLK032385:-:16262..17568
Molecular Weight (calculated)
42114.8 Da
IEP (calculated)
10.460
GRAVY (calculated)
-0.826
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKTSKWIRN FLTGKKERTK EKINQSECGF TSTTPGTPKE KRRWSFRRSS ATAPPACAST LKDSSPLPQP PPPPPPQPFV LDSEDEQSKN VSAAEIAIDV
101: EEFAAVKIQA CFRSHLARKA LRALKGLVKL QALVRGHLVR KQATATLRCM QALITLQAKA REQRIRMIGD SPTNTTNLRT SIHKTRIHNI YHENEENIKI
201: VEMDTQSKFY SSAPSAITDM SPRAYSSHFE DCNSFNTAQS SPQCSRFREY YNGDSLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQPSGRR
301: RSSMEAPRNG VPRAVRMQRS SSQLGKESQS HHHHHPWMAI KLDRSNISLM ESECGSTSTI MTNSNYGRHV NVSL
101: EEFAAVKIQA CFRSHLARKA LRALKGLVKL QALVRGHLVR KQATATLRCM QALITLQAKA REQRIRMIGD SPTNTTNLRT SIHKTRIHNI YHENEENIKI
201: VEMDTQSKFY SSAPSAITDM SPRAYSSHFE DCNSFNTAQS SPQCSRFREY YNGDSLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQPSGRR
301: RSSMEAPRNG VPRAVRMQRS SSQLGKESQS HHHHHPWMAI KLDRSNISLM ESECGSTSTI MTNSNYGRHV NVSL
001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVS PERLLVSQEN MNFEISTYIS
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVS PERLLVSQEN MNFEISTYIS
Arabidopsis Description
IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.