CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012855.1-P	Field mustard	mitochondrion	99.03	99.03
CDX90650	Canola	mitochondrion	99.03	99.03
AT3G51380.1	Thale cress	mitochondrion	88.35	88.35
CDX73724	Canola	mitochondrion	88.35	70.0
CDX78003	Canola	mitochondrion	88.35	59.87
PGSC0003DMT400009431	Potato	mitochondrion	62.14	48.85
VIT_00s0684g00020.t01	Wine grape	mitochondrion	61.16	45.99
GSMUA_Achr1P02670_001	Banana	mitochondrion	59.22	42.66
KRH07958	Soybean	mitochondrion	58.25	42.55
GSMUA_Achr11P...	Banana	mitochondrion	57.28	29.65
CDY29768	Canola	cytosol	35.92	22.16
OQU93295	Sorghum	plastid	51.46	18.73
Zm00001d048352_P001	Maize	mitochondrion	49.51	18.55
TraesCS5A01G502100.1	Wheat	cytosol, plastid	47.57	12.76
CDY46537	Canola	cytosol, mitochondrion	35.92	12.76
CDX70019	Canola	cytosol, mitochondrion	43.69	12.71
CDX98994	Canola	mitochondrion	43.69	12.71
CDY53440	Canola	mitochondrion	34.95	12.41
TraesCS4D01G327500.1	Wheat	mitochondrion	47.57	12.34
HORVU4Hr1G081190.1	Barley	mitochondrion	46.6	12.34
CDY50677	Canola	nucleus	43.69	12.23
CDX78285	Canola	plastid	40.78	12.21
TraesCS4B01G330700.1	Wheat	mitochondrion	46.6	12.12
CDY36861	Canola	nucleus	43.69	12.03
CDY45643	Canola	cytosol	37.86	11.96
CDY72577	Canola	cytosol, mitochondrion	32.04	11.38
CDY64325	Canola	cytosol	40.78	11.26
CDY43103	Canola	cytosol	38.84	10.87
CDX81042	Canola	plastid	40.78	10.85
CDY67178	Canola	cytosol, mitochondrion	40.78	10.82
CDY68636	Canola	cytosol	40.78	10.8
CDY00253	Canola	plastid	40.78	10.66
CDX86928	Canola	mitochondrion, plastid	40.78	10.66
CDX82400	Canola	cytosol	37.86	10.46
CDX75883	Canola	cytosol	37.86	10.4
CDX92076	Canola	cytosol	38.84	10.34
CDX70272	Canola	cytosol, mitochondrion	29.13	10.24
CDY41423	Canola	cytosol, mitochondrion	29.13	10.24
CDY00251	Canola	plastid	40.78	10.22
CDY30233	Canola	mitochondrion	37.86	10.05
CDY14162	Canola	endoplasmic reticulum	32.04	9.85
CDY04907	Canola	endoplasmic reticulum	32.04	9.85
CDY47784	Canola	mitochondrion	36.89	9.79
CDX94150	Canola	nucleus	43.69	9.7
CDX98786	Canola	nucleus	44.66	9.68
CDX85648	Canola	nucleus	36.89	9.62
CDX91120	Canola	nucleus	34.95	9.6
CDY41368	Canola	mitochondrion, plastid	38.84	9.52
CDX76341	Canola	mitochondrion, plastid	38.84	9.52
CDX98787	Canola	mitochondrion	27.18	9.46
CDY53133	Canola	nucleus	43.69	9.26
CDY41252	Canola	cytosol, mitochondrion	43.69	9.22
CDY41417	Canola	mitochondrion	26.21	9.03
CDX78523	Canola	nucleus	38.84	8.97
CDX70505	Canola	nucleus	38.84	8.97
CDX83805	Canola	cytosol, mitochondrion	33.98	6.27
CDY19251	Canola	cytosol, mitochondrion	33.98	6.25
CDY26720	Canola	cytosol, mitochondrion	33.98	6.21
CDY03037	Canola	cytosol	32.04	5.71
CDY67405	Canola	cytosol	32.04	5.7
CDY45197	Canola	nucleus, plastid	32.04	5.66
CDY41676	Canola	cytosol, plastid	31.07	5.57
CDY39317	Canola	cytosol	32.04	5.44
CDY49085	Canola	cytosol	32.04	5.38
CDX96693	Canola	nucleus	33.98	5.2
CDY04138	Canola	cytosol, plastid	27.18	4.99
CDY04137	Canola	cytosol, plastid	27.18	4.97
CDY17427	Canola	cytosol, plastid	27.18	4.94
CDX83739	Canola	nucleus	31.07	4.33
CDY44186	Canola	nucleus, plastid	30.1	4.24
CDY62588	Canola	nucleus	30.1	4.18
CDY29389	Canola	nucleus, plastid	30.1	4.14
CDX75112	Canola	cytosol	1.94	1.44
Os05t0100008-00	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.5.190	MapMan:35.2	UniProt:A0A078GU53	EnsemblPlants:CDY29016	ProteinID:CDY29016	ProteinID:CDY29016.1
GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0007339
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	EnsemblPlantsGene:GSBRNA2T00041748001	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS
InterPro:P-loop_NTPase	PFAM:PF00612	PIRSF:PIRSF016533	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF86
SMART:SM00015	SUPFAM:SSF52540	InterPro:Sp17	UniParc:UPI0004EF4B06	SEG:seg	:

Description

BnaC07g32220DBnaC07g32220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GU53]

Coordinates

chrLK032229:-:195487..195908

Molecular Weight (calculated)

11776.8 Da

IEP (calculated)

13.230

GRAVY (calculated)

-0.084

Length

103 amino acids

Sequence
(BLAST)

001: MANSKRLFGV VRRNLLRRSP SSITTIRSSI QQTTRENIAA IKIQAFFRGH LGRRAFRALK SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRARQI
101: LSH

Best Arabidopsis Sequence Match ( AT3G51380.1 )
(BLAST)

001: MANSKRLFGV VRRKLLRRSQ SRITIIRSSA PETTREEIAA VKIQAFFRGH LARRAFKALK SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRARQL
101: LSH

Arabidopsis Description

IQD20At3g51380 [Source:UniProtKB/TrEMBL;Acc:Q9SD11]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.