Factsheet for GSMUA_Achr11P01230_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P02670_001	Banana	mitochondrion	51.76	72.03
Bra012855.1-P	Field mustard	mitochondrion	30.15	58.25
CDX90650	Canola	mitochondrion	30.15	58.25
AT3G51380.1	Thale cress	mitochondrion	30.15	58.25
CDY29016	Canola	mitochondrion	29.65	57.28
PGSC0003DMT400009431	Potato	mitochondrion	33.17	50.38
VIT_00s0684g00020.t01	Wine grape	mitochondrion	32.16	46.72
CDX73724	Canola	mitochondrion	30.15	46.15
KRH07958	Soybean	mitochondrion	30.15	42.55
CDX78003	Canola	mitochondrion	30.65	40.13
Bra036812.1-P	Field mustard	mitochondrion	30.15	38.96
OQU93295	Sorghum	plastid	37.19	26.15
Zm00001d048352_P001	Maize	mitochondrion	35.18	25.45
GSMUA_Achr4P21190_001	Banana	cytosol	19.6	19.4
HORVU4Hr1G081190.1	Barley	mitochondrion	36.68	18.77
TraesCS5A01G502100.1	Wheat	cytosol, plastid	34.67	17.97
TraesCS4D01G327500.1	Wheat	mitochondrion	34.67	17.38
TraesCS4B01G330700.1	Wheat	mitochondrion	34.17	17.17
GSMUA_Achr1P19900_001	Banana	cytosol	17.59	15.02
GSMUA_Achr8P11920_001	Banana	cytosol	26.63	14.76
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	29.15	13.24
GSMUA_AchrUn_...	Banana	cytosol	25.13	13.19
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	28.14	13.05
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	29.65	12.85
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	26.63	12.53
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	24.62	12.25
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	23.12	12.2
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	22.61	12.2
GSMUA_Achr4P30750_001	Banana	mitochondrion	16.08	11.94
GSMUA_Achr6P26400_001	Banana	cytosol, mitochondrion	23.62	11.84
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	22.11	11.73
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	23.62	11.58
GSMUA_Achr8P26800_001	Banana	cytosol	21.61	11.5
GSMUA_Achr8P27610_001	Banana	cytosol, mitochondrion	19.1	11.21
GSMUA_Achr9P06040_001	Banana	cytosol	21.61	11.2
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	22.61	11.14
GSMUA_Achr10P...	Banana	cytosol	23.62	10.66
GSMUA_Achr3P17450_001	Banana	nucleus	23.62	10.47
GSMUA_Achr3P14930_001	Banana	cytosol	19.6	10.29
GSMUA_AchrUn_...	Banana	mitochondrion	22.61	8.89
GSMUA_Achr8P26180_001	Banana	mitochondrion	20.6	7.81
GSMUA_Achr2P15790_001	Banana	cytosol	20.6	7.16
GSMUA_Achr4P30780_001	Banana	cytosol, mitochondrion	17.59	6.32
GSMUA_Achr1P06080_001	Banana	nucleus	22.61	5.78
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	23.62	5.56
GSMUA_Achr8P19690_001	Banana	mitochondrion	7.54	5.45
GSMUA_Achr3P11240_001	Banana	nucleus	18.09	4.61
GSMUA_Achr1P19910_001	Banana	nucleus	3.02	1.0
Os05t0100008-00	Rice	cytosol	0.0	0.0
GSMUA_Achr2P00850_001	Banana	nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:1.20.5.190	MapMan:35.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr11G01230_001	EnsemblPlants:GSMUA_Achr11P01230_001	EnsemblPlants:GSMUA_Achr11T01230_001	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	UniProt:M0RNF4	InterPro:P-loop_NTPase	PFAM:PF00612	PFscan:PS50096	PANTHER:PTHR32295
PANTHER:PTHR32295:SF86	SMART:SM00015	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000295C293	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G01230_001]

Coordinates

chr11:-:842963..843851

Molecular Weight (calculated)

22216.9 Da

IEP (calculated)

9.181

GRAVY (calculated)

0.142

Length

199 amino acids

Sequence
(BLAST)

001: MARAWRWLGA ARRALARSSC TNATDLDAIR NTTTTIYNPM TAPAAAEGEA EVSVSKNSSY HPREDETVAY RDAFSREDLA AITIQACFRG HLARRAFRAL
101: RSLVRLQAVV RGACVRRQAR IAIHCMQALV RLQVRVRARQ LLDGSGECLD ASLTFFFCCF GDHTIAYSVL VSIFFLWVGV GEMILEKNLL IFTSIYCST

Best Arabidopsis Sequence Match ( AT3G51380.1 )
(BLAST)

001: MANSKRLFGV VRRKLLRRSQ SRITIIRSSA PETTREEIAA VKIQAFFRGH LARRAFKALK SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRARQL
101: LSH

Arabidopsis Description

IQD20At3g51380 [Source:UniProtKB/TrEMBL;Acc:Q9SD11]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.