Factsheet for GSMUA_Achr6P26400_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P06040_001	Banana	cytosol	64.23	66.41
GSMUA_Achr8P27610_001	Banana	cytosol, mitochondrion	51.39	60.18
GSMUA_Achr4P21190_001	Banana	cytosol	19.65	38.81
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	35.26	37.94
GSMUA_Achr10P...	Banana	cytosol	42.07	37.87
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	35.26	37.14
GSMUA_AchrUn_...	Banana	cytosol	34.76	36.41
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	36.78	36.14
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	33.25	35.2
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	34.01	33.25
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	33.25	33.0
GSMUA_Achr8P11920_001	Banana	cytosol	29.72	32.87
GSMUA_Achr1P02670_001	Banana	mitochondrion	11.08	30.77
GSMUA_Achr8P26800_001	Banana	cytosol	28.97	30.75
GSMUA_Achr3P14930_001	Banana	cytosol	28.97	30.34
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	29.97	28.13
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	30.98	28.08
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	29.97	27.74
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	30.48	26.36
GSMUA_Achr3P17450_001	Banana	nucleus	27.71	24.5
GSMUA_Achr11P...	Banana	mitochondrion	11.84	23.62
GSMUA_Achr2P00850_001	Banana	nucleus, plastid	5.04	22.22
GSMUA_Achr1P19900_001	Banana	cytosol	12.59	21.46
GSMUA_Achr8P19690_001	Banana	mitochondrion	12.85	18.55
GSMUA_Achr4P30750_001	Banana	mitochondrion	10.58	15.67
GSMUA_Achr8P26180_001	Banana	mitochondrion	20.15	15.24
GSMUA_Achr2P15790_001	Banana	cytosol	20.91	14.49
GSMUA_Achr4P30780_001	Banana	cytosol, mitochondrion	19.4	13.9
GSMUA_AchrUn_...	Banana	mitochondrion	16.62	13.04
GSMUA_Achr3P11240_001	Banana	nucleus	22.17	11.27
GSMUA_Achr1P06080_001	Banana	nucleus	21.16	10.78
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	22.42	10.52
GSMUA_Achr1P19910_001	Banana	nucleus	10.58	7.02

Protein Annotations

EnsemblPlants:GSMUA_Achr6P26400_001	EnsemblPlants:GSMUA_Achr6T26400_001	EnsemblPlantsGene:GSMUA_Achr6G26400_001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF10
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	UniParc:UPI000295C6BA	UniProt:M0TAD5
MapMan:35.2	:	:	:	:	:

Description

Putative IQ calmodulin-binding motif family protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G26400_001]

Coordinates

chr6:+:27178456..27179805

Molecular Weight (calculated)

44507.3 Da

IEP (calculated)

11.204

GRAVY (calculated)

-0.670

Length

397 amino acids

Sequence
(BLAST)

001: MGRATRWLRS LLGRKKDPKV HKDNASTNGY EMKDTMRWSF ARPRQAESMC SSPVSATEAA WLRSFYDDTE EESKHAMAVA VATVAAANVA ATAAQAAMVR
101: LKGLGREGAT PCTSYQWWAA VKIQTAFRCH LAKKALRALK GLVKLQALVR GCLVRKQAAI TLRRLQALVR AQAVVRPREA RVLPHQSRRF DAEFCHRTSF
201: ERFDNRGDRC RHIGLEQSND LDASPKILEM DTFQLRSKSF RRTSSNFDES MVPISSPLPF KVPSRLSISS CRNPDKSPNS KTAQNTPRLR PETPARSTTA
301: DMVPRQTPSP SSCPNYMANT SSFAAKVRPQ STPKQRPEKA ASPRKKKVLA SETESRTRSP LRAHNAYNLY NGTVGKLDRS AKSLRKAARD HYIDCMW

Best Arabidopsis Sequence Match ( AT4G29150.1 )
(BLAST)

001: MRKNLTKLTR VKRETKMGRA TRWFKGLFGI KPSSCSGTDS GTISNRLDRS LCDSYETIPP NISEKEAAWL RSFYAAGEEE KERRTHAIAV AAATAAAADA
101: AVAAAKAAAA VVRLQGQGKS GPLGGGKSRE HRAAMQIQCA FRGYLARKAL RALRGVVKIQ ALVRGFLVRN QAAATLRSME ALVRAQKTVK IQRALRRNGN
201: AAPARKSTER FSGSLENRNN GEETAKIVEV DTGTRPGTYR IRAPVLSGSD FLDNPFRRTL SSPLSGRVPP RLSMPKPEWE ECSSKFPTAQ STPRFSGGSP
301: ARSVCCSGGG VEAEVDTEAD ANRFCFLSGE FNSGYMADTT SFRAKLRSHS APRQRPESNA SAGGWRRSIG GGGVRMQRQS CSGVREAVVG NIERRRMRW

Arabidopsis Description

IQD25IQ-domain 25 [Source:UniProtKB/TrEMBL;Acc:F4JMV6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.