Factsheet for GSMUA_Achr3P17450_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0355700-00	Rice	cytosol	45.43	45.23
Zm00001d029197_P001	Maize	nucleus	46.77	44.12
EER94844	Sorghum	cytosol	48.33	43.49
TraesCS5A01G163000.1	Wheat	nucleus	45.88	43.28
TraesCS5D01G168000.2	Wheat	nucleus	45.66	42.71
TraesCS5B01G160400.1	Wheat	cytosol	45.21	42.65
CDY41423	Canola	cytosol, mitochondrion	23.83	36.52
CDX70272	Canola	cytosol, mitochondrion	23.83	36.52
HORVU5Hr1G050840.5	Barley	cytosol, plastid	44.1	35.61
KRH33197	Soybean	cytosol, mitochondrion	29.84	34.36
VIT_13s0019g01830.t01	Wine grape	mitochondrion, nucleus	34.74	33.26
CDY72577	Canola	cytosol, mitochondrion	21.38	33.1
Bra009498.1-P	Field mustard	cytosol, mitochondrion	27.39	32.2
Bra028807.1-P	Field mustard	mitochondrion	27.17	32.11
PGSC0003DMT400033127	Potato	cytosol, mitochondrion	28.95	32.1
CDY04907	Canola	endoplasmic reticulum	23.83	31.94
CDY14162	Canola	endoplasmic reticulum	23.83	31.94
GSMUA_Achr1P02670_001	Banana	mitochondrion	10.02	31.47
VIT_08s0007g05960.t01	Wine grape	cytosol	29.62	31.29
Solyc04g016480.2.1	Tomato	mitochondrion, nucleus	28.51	31.22
CDY41417	Canola	mitochondrion	20.71	31.1
GSMUA_Achr4P21190_001	Banana	cytosol	13.81	30.85
KRH23930	Soybean	nucleus	30.73	30.0
AT5G03960.2	Thale cress	cytosol, mitochondrion	26.95	29.95
GSMUA_Achr8P11920_001	Banana	cytosol	23.61	29.53
KRH39865	Soybean	nucleus	30.73	29.42
GSMUA_Achr8P27610_001	Banana	cytosol, mitochondrion	21.83	28.91
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	26.95	28.21
VIT_08s0007g05980.t01	Wine grape	cytosol	28.29	28.1
Solyc01g088250.2.1	Tomato	cytosol, plastid	28.51	27.95
GSMUA_Achr10P...	Banana	cytosol	27.39	27.89
GSMUA_Achr6P26400_001	Banana	cytosol, mitochondrion	24.5	27.71
GSMUA_Achr9P06040_001	Banana	cytosol	23.61	27.6
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	26.5	27.17
KRH29958	Soybean	cytosol, mitochondrion	27.62	27.13
GSMUA_Achr8P26800_001	Banana	cytosol	22.49	27.01
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	22.27	26.67
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	21.83	26.56
PGSC0003DMT400017589	Potato	cytosol, plastid	25.39	26.51
KRH63082	Soybean	cytosol	26.5	26.44
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	23.83	26.35
GSMUA_AchrUn_...	Banana	cytosol	22.05	26.12
CDX85648	Canola	nucleus	22.94	26.08
Bra023414.1-P	Field mustard	nucleus	22.94	26.08
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	21.83	25.99
Solyc10g079240.1.1	Tomato	mitochondrion, nucleus	24.28	25.89
GSMUA_Achr3P14930_001	Banana	cytosol	21.38	25.33
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	25.39	24.84
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	22.27	24.75
CDX78523	Canola	nucleus	24.05	24.22
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	22.72	24.11
CDX91120	Canola	nucleus	20.04	24.0
CDX70505	Canola	nucleus	23.83	23.99
Bra006201.1-P	Field mustard	nucleus	23.83	23.94
GSMUA_Achr11P...	Banana	mitochondrion	10.47	23.62
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	20.94	23.5
AT5G13460.1	Thale cress	nucleus	22.94	23.25
GSMUA_Achr2P00850_001	Banana	nucleus, plastid	4.23	21.11
PGSC0003DMT400021096	Potato	nucleus	9.35	19.0
GSMUA_Achr1P19900_001	Banana	cytosol	9.58	18.45
GSMUA_Achr8P19690_001	Banana	mitochondrion	10.69	17.45
GSMUA_Achr8P26180_001	Banana	mitochondrion	18.49	15.81
GSMUA_Achr4P30750_001	Banana	mitochondrion	8.91	14.93
GSMUA_AchrUn_...	Banana	mitochondrion	16.48	14.62
GSMUA_Achr2P15790_001	Banana	cytosol	18.49	14.49
GSMUA_Achr4P30780_001	Banana	cytosol, mitochondrion	17.15	13.9
GSMUA_Achr3P11240_001	Banana	nucleus	18.04	10.37
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	18.04	9.57
GSMUA_Achr1P06080_001	Banana	nucleus	16.48	9.5
GSMUA_Achr1P19910_001	Banana	nucleus	8.91	6.69

Protein Annotations

EnsemblPlants:GSMUA_Achr3P17450_001	EnsemblPlants:GSMUA_Achr3T17450_001	EnsemblPlantsGene:GSMUA_Achr3G17450_001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF41
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI000294D595
UniProt:M0SFG1	MapMan:35.2	:	:	:	:

Description

IQ calmodulin-binding motif family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G17450_001]

Coordinates

chr3:-:19038606..19040647

Molecular Weight (calculated)

50398.9 Da

IEP (calculated)

11.036

GRAVY (calculated)

-0.678

Length

449 amino acids

Sequence
(BLAST)

001: MARRKSWFDR VKRFFVSDSN AKTEKKERRR RWLVLRLKSK CSPALPVPST MNARSLKEAE EEQSKHAMAV AVATAAAAEA AVAAAQAAAQ VVRLTGNPPY
101: HQRLETAAIK IQATFRGHLA RKALRALKGL VRLQALVRGQ AVRRQTSLTL QGLQSLMRIQ SKACASRSRA SEEQACELKE IVHARPKESD DLKLTLHKNS
201: ERRWDSSILS KEEINAILRS RREAAVKRLR ALEYASSYQE RRNAQRPSTP TGKEVQADDL NNRWRWLEEW VGAQPLDKDV VEINPLPVPE KGYRDQPSPV
301: PGSLVLDKEK AEEAQLRDLA RRSFIRSRTT SVRDDDSFSS SPSFPSYMAS TASTKARFRS MSTPKQRAGA GDVCFDQFTP YSNKILSPFH SVVSDISLSS
401: KSSKPPLAHQ RSPRLKGQAA PVRSHRPSID LSFDSQCPVA NWDQHGAFR

Best Arabidopsis Sequence Match ( AT5G13460.1 )
(BLAST)

001: MAKKKGLFTV LKRIFISEVN SEKKEKRRKW TFWKLRIKKR LPSITAPPEH RTSHESHEEQ KEEIVSDVGE ISQVSCSRQL DSIEESKGST SPETADLVVQ
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR

Arabidopsis Description

IQD11IQ-domain 11 [Source:UniProtKB/TrEMBL;Acc:Q9LYR0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.