Factsheet for Solyc10g079240.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021096	Potato	nucleus	49.41	94.12
Solyc04g016480.2.1	Tomato	mitochondrion, nucleus	59.86	61.46
VIT_08s0007g05960.t01	Wine grape	cytosol	42.52	42.12
CDY72577	Canola	cytosol, mitochondrion	26.6	38.62
KRH33197	Soybean	cytosol, mitochondrion	35.63	38.46
CDX70272	Canola	cytosol, mitochondrion	26.37	37.88
CDY41423	Canola	cytosol, mitochondrion	26.13	37.54
Bra028807.1-P	Field mustard	mitochondrion	33.49	37.11
Bra009498.1-P	Field mustard	cytosol, mitochondrion	33.02	36.39
AT5G03960.2	Thale cress	cytosol, mitochondrion	34.2	35.64
VIT_08s0007g05980.t01	Wine grape	cytosol	37.53	34.96
CDY41417	Canola	mitochondrion	24.47	34.45
CDY14162	Canola	endoplasmic reticulum	26.6	33.43
CDY04907	Canola	endoplasmic reticulum	26.6	33.43
Solyc08g007930.1.1	Tomato	cytosol	15.44	28.63
Solyc08g007920.1.1	Tomato	cytosol	15.44	27.78
Solyc01g088250.2.1	Tomato	cytosol, plastid	28.27	25.98
GSMUA_Achr3P17450_001	Banana	nucleus	25.89	24.28
TraesCS5D01G168000.2	Wheat	nucleus	26.84	23.54
TraesCS5A01G163000.1	Wheat	nucleus	26.37	23.32
TraesCS5B01G160400.1	Wheat	cytosol	26.37	23.32
Solyc06g066430.2.1	Tomato	nucleus	21.38	22.96
EER94844	Sorghum	cytosol	27.08	22.85
Solyc12g008520.1.1	Tomato	cytosol	22.09	22.74
Os03t0355700-00	Rice	cytosol	24.23	22.62
Zm00001d029197_P001	Maize	nucleus	25.42	22.48
Solyc09g082560.2.1	Tomato	nucleus	22.57	20.34
HORVU5Hr1G050840.5	Barley	cytosol, plastid	25.89	19.6
Solyc03g026110.2.1	Tomato	cytosol, mitochondrion	22.33	19.34
Solyc08g080470.2.1	Tomato	plastid	22.57	19.04
Solyc02g087760.2.1	Tomato	nucleus	19.0	14.39
Solyc05g007130.2.1	Tomato	cytosol, plastid	14.25	10.89
Solyc04g081210.2.1	Tomato	nucleus	18.76	9.16

Protein Annotations

EMBL:EU491503	EnsemblPlants:Solyc10g079240.1.1	EnsemblPlantsGene:Solyc10g079240.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF41	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	ProteinID:ABO36630.1	ProteinID:ABO36639.1	SEG:seg	UniParc:UPI000171BDAA
UniProt:B1N669	MapMan:35.2	:	:	:	:

Description

Putative calmodulin binding protein SUN [Source:UniProtKB/TrEMBL;Acc:B1N669]

Coordinates

chr10:+:60816036..60818265

Molecular Weight (calculated)

48278.2 Da

IEP (calculated)

11.076

GRAVY (calculated)

-0.750

Length

421 amino acids

Sequence
(BLAST)

001: MGKRRNWFTF VKRLFIPETE STADQKKPKR WRCCFLRKFK LRKCPAITSA PQQTLPEAKG TPQQTLTEAK EQQRKHAFAV AIATAAAAEA AVAAANAAAD
101: VIRLTDAPSE FKRKRKQAAI RIQSAYRAHL AQKALRALKG VVKLQAVIRG EIVRGRLIAK LKFMLPLHQK SKTRVNQIRV PTFEDHHDKK LINSPREIMK
201: AKELKLKCKS LSTWNFNLAS EQDSEALWSR REEAIDKREH LMKYSFSHRE RRNDQTLQDL LNRKQNRRSY RIDQLVELDA PRKAGLLEKL RSFTDSNVPL
301: TDMDGMTQLQ VRKMHRSDCI EDLHSPSSLP RRSFSNAKRK SNVDDNSLPS SPIFPTYMAA TESAKAKTRS NSTAKQHLRL HETLSGQHSP YNLKISSWRL
401: SNGEMYDSAR TSRTSSSYML I

Best Arabidopsis Sequence Match ( AT5G03960.3 )
(BLAST)

001: MAKRRSWFGW MKRLFICEAK ARAEKKPRRL RWVFKRLKLR PQLATCGQET RTLNEATQDQ RKHAMNVAIA TAAAAEAAVA AAKAAAEVVR MAGNAFTSQH
101: FVKKLAPNVA AIKIQSAFRA SLARKALRAL KALVRLQAIV RGRAVRRKVS ALLKSSHSNK ASTSNIIQRQ TERKHWSNTK SEIKEELQVS NHSLCNSKVK
201: CNGWDSSALT KEDIKAIWLR KQEGVIKRDR MLKYSRSQRE RRSPHMLVES LYAKDMGMRS CRLEHWGESK SAKSINSFLI PSEMLVPTKV KLRSLQRQDS
301: GDGQDSPFSF PRRSFSRLEQ SILEDESWFQ RSNGFQPYMS VTESAREKMR SLSTPRQRVG IMDSLFDNYK KDGDKVSLWS TFVCENSKIN NAKKSSLTTY
401: QHNC

Arabidopsis Description

IQD12IQ-domain 12 [Source:TAIR;Acc:AT5G03960]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.