CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41423	Canola	cytosol, mitochondrion	35.38	47.1
CDY72577	Canola	cytosol, mitochondrion	34.87	46.9
CDX70272	Canola	cytosol, mitochondrion	34.87	46.42
Bra028807.1-P	Field mustard	mitochondrion	42.56	43.68
Bra009498.1-P	Field mustard	cytosol, mitochondrion	42.56	43.46
VIT_08s0007g05960.t01	Wine grape	cytosol	46.92	43.06
CDY41417	Canola	mitochondrion	32.31	42.14
AT5G03960.2	Thale cress	cytosol, mitochondrion	43.08	41.58
CDY04907	Canola	endoplasmic reticulum	35.38	41.19
CDY14162	Canola	endoplasmic reticulum	35.38	41.19
PGSC0003DMT400033127	Potato	cytosol, mitochondrion	41.28	39.75
Solyc04g016480.2.1	Tomato	mitochondrion, nucleus	41.28	39.27
VIT_08s0007g05980.t01	Wine grape	cytosol	44.36	38.27
Solyc10g079240.1.1	Tomato	mitochondrion, nucleus	38.46	35.63
KRH39865	Soybean	nucleus	39.49	32.84
KRH23930	Soybean	nucleus	38.72	32.83
PGSC0003DMT400021096	Potato	nucleus	17.95	31.67
KRH29958	Soybean	cytosol, mitochondrion	35.9	30.63
GSMUA_Achr3P17450_001	Banana	nucleus	34.36	29.84
KRH63082	Soybean	cytosol	33.85	29.33
TraesCS5A01G163000.1	Wheat	nucleus	30.26	24.79
TraesCS5D01G168000.2	Wheat	nucleus	30.26	24.58
TraesCS5B01G160400.1	Wheat	cytosol	30.0	24.58
KRH07958	Soybean	mitochondrion	8.72	24.11
Os03t0355700-00	Rice	cytosol	27.69	23.95
Zm00001d029197_P001	Maize	nucleus	28.97	23.74
EER94844	Sorghum	cytosol	29.49	23.05
KRH47199	Soybean	cytosol	23.33	22.98
KRH44268	Soybean	cytosol	23.33	22.64
KRH60203	Soybean	cytosol, mitochondrion	20.77	22.5
KRH35475	Soybean	cytosol	26.67	22.17
KRG91354	Soybean	cytosol, plastid	25.9	21.58
KRH48993	Soybean	plastid	5.13	21.28
KRH03972	Soybean	cytosol	24.1	21.03
KRH74242	Soybean	cytosol, mitochondrion	22.56	20.95
KRH57246	Soybean	cytosol	23.59	20.67
HORVU5Hr1G050840.5	Barley	cytosol, plastid	29.23	20.5
KRH48992	Soybean	endoplasmic reticulum	17.69	20.41
KRH41488	Soybean	cytosol, mitochondrion	22.56	20.18
KRH77498	Soybean	cytosol, mitochondrion	19.49	19.19
KRH38565	Soybean	cytosol	23.59	19.09
KRG91452	Soybean	cytosol	22.31	19.08
KRH09113	Soybean	cytosol	23.08	18.87
KRH35361	Soybean	cytosol, mitochondrion	22.31	18.75
KRH23382	Soybean	cytosol	17.95	18.42
KRH69109	Soybean	nucleus	19.49	18.23
KRH31669	Soybean	cytosol, mitochondrion	19.49	17.97
KRH09951	Soybean	cytosol	17.18	17.72
KRH68719	Soybean	cytosol	15.9	16.58
KRG96957	Soybean	cytosol	15.38	16.22
KRG99144	Soybean	cytosol, plastid	18.72	13.35
KRH74806	Soybean	cytosol, plastid	18.46	12.79
KRH45861	Soybean	plastid	17.69	12.61
KRH69321	Soybean	cytosol, mitochondrion	18.21	12.61
KRH56937	Soybean	cytosol	17.69	11.77
KRH03447	Soybean	nucleus	17.44	11.56
KRH54515	Soybean	cytosol	17.18	11.47
KRH63392	Soybean	cytosol	16.92	11.32
KRH51729	Soybean	cytosol	18.21	8.36
KRH61064	Soybean	nucleus	8.46	4.54

Protein Annotations

EMBL:ACUP02006417	EnsemblPlants:KRH33197	EnsemblPlantsGene:GLYMA_10G106000	EntrezGene:100800767	Gene3D:1.20.5.190	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295
PANTHER:PTHR32295:SF41	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:KRH33197	ProteinID:KRH33197.1
SEG:seg	SMART:SM00015	UniParc:UPI000296E324	UniProt:K7LIJ0	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr10:+:23915977..23918983

Molecular Weight (calculated)

44335.5 Da

IEP (calculated)

10.540

GRAVY (calculated)

-0.797

Length

390 amino acids

Sequence
(BLAST)

001: MAKRKSWFGW VKRLFTSESK DNKKPNRWGW SFGRIKQKQY PTITAPNRTL IEASEEQRKH ALTVAIATAA AAEAAVAAAH AAAEVVKLTG TSRSYSYLSK
101: GDKSLAAIKI QSTYRAHLAR KALRALKGVI RLQAIIRGQA VRRQVSNNIL QNFPSNVRNQ VGIQERSSHN TAEQIQQSPK QKKKIEEKEL KSECHGQRTW
201: DCSLLSREDI EAIWFRKQEA MVKRERMKQY SSSQRETKNN QMLEESVHNK DFGRESCHTL GDWLHQETRD WDLVYKPTLT SNLITTKKEF QEGLSTQTSI
301: PRKSFSLVKR SLNGDESSMS NSLVFPTYMA VTESSKAKMR SISTPKQRTG ILDICSNQNE PHKEGIFFGS SYYGATSSTN ENSASYQQRC

Best Arabidopsis Sequence Match ( AT5G03960.3 )
(BLAST)

001: MAKRRSWFGW MKRLFICEAK ARAEKKPRRL RWVFKRLKLR PQLATCGQET RTLNEATQDQ RKHAMNVAIA TAAAAEAAVA AAKAAAEVVR MAGNAFTSQH
101: FVKKLAPNVA AIKIQSAFRA SLARKALRAL KALVRLQAIV RGRAVRRKVS ALLKSSHSNK ASTSNIIQRQ TERKHWSNTK SEIKEELQVS NHSLCNSKVK
201: CNGWDSSALT KEDIKAIWLR KQEGVIKRDR MLKYSRSQRE RRSPHMLVES LYAKDMGMRS CRLEHWGESK SAKSINSFLI PSEMLVPTKV KLRSLQRQDS
301: GDGQDSPFSF PRRSFSRLEQ SILEDESWFQ RSNGFQPYMS VTESAREKMR SLSTPRQRVG IMDSLFDNYK KDGDKVSLWS TFVCENSKIN NAKKSSLTTY
401: QHNC

Arabidopsis Description

IQD12IQ-domain 12 [Source:TAIR;Acc:AT5G03960]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.