Factsheet for HORVU5Hr1G050840.5

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G163000.1	Wheat	nucleus	78.24	91.39
TraesCS5D01G168000.2	Wheat	nucleus	78.6	91.04
TraesCS5B01G160400.1	Wheat	cytosol	77.34	90.34
Os03t0355700-00	Rice	cytosol	60.43	74.5
Zm00001d029197_P001	Maize	nucleus	55.94	65.34
EER94844	Sorghum	cytosol	58.27	64.93
GSMUA_Achr3P17450_001	Banana	nucleus	35.61	44.1
CDX70272	Canola	cytosol, mitochondrion	17.09	32.42
CDY41423	Canola	cytosol, mitochondrion	16.73	31.74
VIT_13s0019g01830.t01	Wine grape	mitochondrion, nucleus	25.36	30.06
PGSC0003DMT400033127	Potato	cytosol, mitochondrion	21.76	29.88
Bra009498.1-P	Field mustard	cytosol, mitochondrion	20.5	29.84
CDY72577	Canola	cytosol, mitochondrion	15.47	29.66
KRH33197	Soybean	cytosol, mitochondrion	20.5	29.23
Bra028807.1-P	Field mustard	mitochondrion	19.96	29.21
VIT_08s0007g05960.t01	Wine grape	cytosol	22.12	28.94
Solyc04g016480.2.1	Tomato	mitochondrion, nucleus	21.04	28.54
KRH23930	Soybean	nucleus	23.56	28.48
KRH39865	Soybean	nucleus	23.2	27.51
CDY14162	Canola	endoplasmic reticulum	16.55	27.46
CDY04907	Canola	endoplasmic reticulum	16.55	27.46
AT5G03960.2	Thale cress	cytosol, mitochondrion	19.6	26.98
KRH29958	Soybean	cytosol, mitochondrion	21.58	26.26
VIT_08s0007g05980.t01	Wine grape	cytosol	21.22	26.11
KRH63082	Soybean	cytosol	21.04	26.0
Solyc10g079240.1.1	Tomato	mitochondrion, nucleus	19.6	25.89
CDY41417	Canola	mitochondrion	13.85	25.75
Solyc01g088250.2.1	Tomato	cytosol, plastid	21.04	25.55
CDX85648	Canola	nucleus	17.81	25.06
Bra023414.1-P	Field mustard	nucleus	17.81	25.06
PGSC0003DMT400017589	Potato	cytosol, plastid	18.88	24.42
HORVU2Hr1G106550.2	Barley	mitochondrion	18.88	24.19
HORVU3Hr1G070750.1	Barley	mitochondrion	10.79	24.0
HORVU1Hr1G028250.6	Barley	mitochondrion	22.66	23.91
HORVU0Hr1G005320.2	Barley	cytosol	15.65	23.9
CDX70505	Canola	nucleus	19.06	23.77
CDX78523	Canola	nucleus	19.06	23.77
Bra006201.1-P	Field mustard	nucleus	19.06	23.71
CDX91120	Canola	nucleus	15.47	22.93
AT5G13460.1	Thale cress	nucleus	18.17	22.8
HORVU3Hr1G070760.1	Barley	mitochondrion	15.29	22.43
HORVU5Hr1G093430.4	Barley	cytosol	18.53	22.01
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	22.48	21.82
HORVU4Hr1G073480.2	Barley	cytosol, mitochondrion	17.81	21.76
HORVU1Hr1G075880.4	Barley	cytosol	12.95	20.87
HORVU4Hr1G056380.1	Barley	cytosol, mitochondrion	12.41	20.66
HORVU6Hr1G003870.1	Barley	cytosol, mitochondrion	11.33	20.45
HORVU7Hr1G082120.1	Barley	cytosol	15.11	19.31
PGSC0003DMT400021096	Potato	nucleus	7.19	18.1
HORVU2Hr1G106540.1	Barley	cytosol, nucleus	9.35	17.22
HORVU1Hr1G080360.4	Barley	mitochondrion	17.63	16.64
HORVU3Hr1G067750.8	Barley	cytosol, plastid	14.57	14.57
HORVU4Hr1G081190.1	Barley	mitochondrion	8.81	12.6
HORVU2Hr1G109850.3	Barley	nucleus	13.31	10.35
HORVU2Hr1G124440.1	Barley	cytosol	0.54	4.92

Protein Annotations

EnsemblPlants:HORVU5Hr1G050840.5	EnsemblPlantsGene:HORVU5Hr1G050840	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF41	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI000B472100	UniProt:A0A287R694
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:396411002..396415818

Molecular Weight (calculated)

61666.0 Da

IEP (calculated)

10.581

GRAVY (calculated)

-0.654

Length

556 amino acids

Sequence
(BLAST)

001: STSLSAHPPC SFLRILVAFL SQCSRCSLRF RIRRNGSRHT RAGRQKNGEE EEGVVRAHQE ALHLRAQAET QARQGIVPIL FLTTRENSGK STGDSTVQDF
101: PFIFQKVKSK RWLVGKLKTQ HSFALPAPEP EPEPATDQIQ IRQAEEEQSK HAVAVALATA AAAEAAVAAA HAAAEVVRLT GPPSPAPTRE RDPTYSGHEL
201: FAAVAIQSAY RGYLARRALR ALKGLVRLQA VIRGQAVRRQ TAATLRGLES LVKIQARQRA RADVEHEHEH GGDGMDALLR RGRELYAAAL QEQQQNSRGW
301: DGSTLSKEEM GAVMRSREEA AIKRVRALQY ASIQNEKIGI RRQPMSRDEM ETLNQRWSWL EEWVGSQPFD KDVAIDVITH PHPPPPRSRD SLTCLEDDDH
401: DDDGYGRRLG YSSRRSFGRA RRTPGRGDDG LQACSPAAAF PGYMASTASA KAKFRSMSTP KERFAVPSDA YSEQCFPSFA DRLMSPIPSM SPMPSIASDM
501: GFARSSRPPV AQRSPRVKAG PMTPSRTRSR RSPSRHSFGS EAALHQMQME HYTPIR

Best Arabidopsis Sequence Match ( AT5G13460.1 )
(BLAST)

001: MAKKKGLFTV LKRIFISEVN SEKKEKRRKW TFWKLRIKKR LPSITAPPEH RTSHESHEEQ KEEIVSDVGE ISQVSCSRQL DSIEESKGST SPETADLVVQ
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR

Arabidopsis Description

IQD11IQ-domain 11 [Source:UniProtKB/TrEMBL;Acc:Q9LYR0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.