Factsheet for HORVU4Hr1G056380.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G003870.1	Barley	cytosol, mitochondrion	73.35	79.55
HORVU2Hr1G106550.2	Barley	mitochondrion	81.44	62.67
TraesCS2A01G470100.1	Wheat	cytosol, mitochondrion	77.54	59.68
TraesCS2B01G492900.1	Wheat	cytosol, mitochondrion	77.54	59.4
TraesCS2D01G470000.1	Wheat	cytosol, mitochondrion	77.54	59.27
Os10t0420200-01	Rice	mitochondrion	44.61	43.82
Zm00001d032932_P001	Maize	mitochondrion	53.59	41.82
OQU91764	Sorghum	mitochondrion, plastid	56.29	37.23
GSMUA_Achr4P21190_001	Banana	cytosol	19.76	32.84
HORVU4Hr1G073480.2	Barley	cytosol, mitochondrion	41.32	30.33
HORVU2Hr1G106540.1	Barley	cytosol, nucleus	26.65	29.47
HORVU3Hr1G070750.1	Barley	mitochondrion	20.36	27.2
HORVU5Hr1G093430.4	Barley	cytosol	35.93	25.64
Solyc09g082560.2.1	Tomato	nucleus	35.63	25.48
HORVU3Hr1G070760.1	Barley	mitochondrion	22.46	19.79
HORVU0Hr1G005320.2	Barley	cytosol	21.56	19.78
HORVU1Hr1G075880.4	Barley	cytosol	18.86	18.26
HORVU1Hr1G028250.6	Barley	mitochondrion	27.84	17.65
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	28.14	16.4
HORVU7Hr1G082120.1	Barley	cytosol	19.16	14.71
PGSC0003DMT400016500	Potato	nucleus	11.08	13.91
HORVU5Hr1G050840.5	Barley	cytosol, plastid	20.66	12.41
HORVU4Hr1G081190.1	Barley	mitochondrion	13.17	11.31
HORVU1Hr1G080360.4	Barley	mitochondrion	16.77	9.51
HORVU3Hr1G067750.8	Barley	cytosol, plastid	15.27	9.17
HORVU2Hr1G109850.3	Barley	nucleus	13.17	6.15
HORVU2Hr1G124440.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU4Hr1G056380.1	EnsemblPlantsGene:HORVU4Hr1G056380	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF91	PFAM:PF00612	PFscan:PS50096
SEG:seg	SMART:SM00015	UniParc:UPI000B47B0E8	UniProt:A0A287P5P3	MapMan:35.2	:

Description

No Description!

Coordinates

chrchr4H:-:473155378..473162405

Molecular Weight (calculated)

36593.0 Da

IEP (calculated)

10.999

GRAVY (calculated)

-0.474

Length

334 amino acids

Sequence
(BLAST)

001: MGKAGRWLRS ILAGKKGGGR RGDKWGQSRC DSTPLAELPV AANLREKRRW SFRRPAPPVK IVAAPSSLAL EPGGLSVSVA VAVAEHELEQ SKHAVAVAMA
101: AADAAVIRLT PPEAEDDLNL YATPFQEAAT ARIQATFRGY LARKALCALR GLVKLQALIR GHLVRKQARA TLQRMQALLM AQTRVRAQRI HMLEDEDHTA
201: AALVDHRSPQ HPRRRRSYEM DRSGEEHAKI VEMDMGEPPR RGRSSFSVAA SEPWPREGRR ADYYIPGQCS PAPSAGFTEI TKPARLQWPL QGLRAGDGAH
301: QRVRPAGPTH EGGVRSGAAG WVVEVEHESS RLLV

Best Arabidopsis Sequence Match ( AT4G14750.3 )
(BLAST)

001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVS PERLLVSQEN MNFEISTYIS

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.