Factsheet for TraesCS2A01G470100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G492900.1	Wheat	cytosol, mitochondrion	94.93	94.5
TraesCS2D01G470000.1	Wheat	cytosol, mitochondrion	94.7	94.05
HORVU2Hr1G106550.2	Barley	mitochondrion	92.86	92.86
HORVU6Hr1G003870.1	Barley	cytosol, mitochondrion	56.91	80.19
HORVU4Hr1G056380.1	Barley	cytosol, mitochondrion	59.68	77.54
Zm00001d032932_P001	Maize	mitochondrion	63.13	64.02
Os10t0420200-01	Rice	mitochondrion	49.77	63.53
OQU91764	Sorghum	mitochondrion, plastid	64.75	55.64
GSMUA_Achr4P21190_001	Banana	cytosol	23.5	50.75
TraesCS4A01G028700.1	Wheat	cytosol, mitochondrion	49.77	47.47
PGSC0003DMT400016500	Potato	nucleus	25.58	41.73
Solyc09g082560.2.1	Tomato	nucleus	44.47	41.33
TraesCS5A01G377500.1	Wheat	cytosol	43.09	40.48
TraesCS5A01G055100.1	Wheat	cytosol, mitochondrion	34.1	36.82
TraesCS1A01G122900.1	Wheat	cytosol, plastid	29.72	28.41
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	29.03	26.98
TraesCS1A01G341900.1	Wheat	cytosol	21.2	26.36
TraesCS3A01G275900.1	Wheat	mitochondrion	21.66	25.13
TraesCS5A01G163000.1	Wheat	nucleus	23.96	21.85
TraesCS7A01G332500.1	Wheat	cytosol, mitochondrion	20.74	20.32
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	20.28	15.2
TraesCS3A01G244100.1	Wheat	cytosol, plastid	16.59	13.14
TraesCS5A01G502100.1	Wheat	cytosol, plastid	10.83	12.24
TraesCS2A01G492300.1	Wheat	nucleus	20.51	10.34

Protein Annotations

EnsemblPlants:TraesCS2A01G470100.1	EnsemblPlantsGene:TraesCS2A01G470100	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF91	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	MapMan:35.2	:

Description

No Description!

Coordinates

chr2A:-:712980729..712982978

Molecular Weight (calculated)

47483.1 Da

IEP (calculated)

10.539

GRAVY (calculated)

-0.658

Length

434 amino acids

Sequence
(BLAST)

001: MGKAGRWLRS ILAGKRDGGR RGGKRGQAQC DSTPLAELPA AAIPREKRRW SFRRPAAPVK TAAAPSPLAL EAGGLSESVS ERELEQSKHA VAVIMAAADP
101: AVIRLTAPEA EDDHDLNLYA TPVQEAAAAR IQATFRGYLA RKALCALRGL VKLQALIRGH LVRKQARATL RRMQALLMAQ TRVRAQRMRM LEEEDHAAAP
201: VDRRSPQHPR RRRSYEMDRS GEEHAKIVEM DMGEPPRRGR SSCSVAASEP WSRERPGAEY HGPGQCSPAP SAAFTEITSP RAYSGHFEDF EPATARVSAY
301: VPAGYADEGE SASEFFPNYM ANTQSSRAKA RSQSAPKQRP DSPSPLERQP SRRRGGPAPL PRSVKMQRSS SHVGVPSSAA AMYAQYYPWS VKLDRSSASL
401: HESECGSTSS ILTAATTVGY SRSMVGFEVH RNQY

Best Arabidopsis Sequence Match ( AT4G14750.2 )
(BLAST)

001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVQ GNNNMY

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.