Factsheet for TraesCS2D01G470000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G470100.1	Wheat	cytosol, mitochondrion	94.05	94.7
TraesCS2B01G492900.1	Wheat	cytosol, mitochondrion	93.82	94.04
HORVU2Hr1G106550.2	Barley	mitochondrion	91.76	92.4
HORVU6Hr1G003870.1	Barley	cytosol, mitochondrion	56.75	80.52
HORVU4Hr1G056380.1	Barley	cytosol, mitochondrion	59.27	77.54
Os10t0420200-01	Rice	mitochondrion	49.89	64.12
Zm00001d032932_P001	Maize	mitochondrion	62.7	64.02
OQU91764	Sorghum	mitochondrion, plastid	65.22	56.44
GSMUA_Achr4P21190_001	Banana	cytosol	22.88	49.75
TraesCS4D01G275700.3	Wheat	cytosol, mitochondrion	48.97	44.31
PGSC0003DMT400016500	Potato	nucleus	26.09	42.86
Solyc09g082560.2.1	Tomato	nucleus	45.54	42.61
TraesCS5D01G387500.1	Wheat	cytosol	43.25	40.82
TraesCS1D01G123800.1	Wheat	cytosol	31.35	30.18
TraesCS2D01G398300.1	Wheat	cytosol, mitochondrion	31.58	29.87
TraesCS3D01G109900.1	Wheat	cytosol, mitochondrion	30.21	28.63
TraesCS1D01G344200.1	Wheat	cytosol	21.74	27.46
TraesCS3D01G275900.1	Wheat	mitochondrion	22.2	25.53
TraesCS5D01G168000.2	Wheat	nucleus	24.71	22.5
TraesCS7D01G341000.1	Wheat	cytosol	21.97	21.67
TraesCS1D01G361800.3	Wheat	cytosol, mitochondrion, plastid	20.59	15.54
TraesCS3D01G247300.1	Wheat	cytosol, plastid	16.93	13.5
TraesCS4D01G327500.1	Wheat	mitochondrion	10.98	12.09
TraesCS2D01G492600.1	Wheat	nucleus	20.82	10.57

Protein Annotations

EnsemblPlants:TraesCS2D01G470000.1	EnsemblPlantsGene:TraesCS2D01G470000	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF91	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	MapMan:35.2	:

Description

No Description!

Coordinates

chr2D:-:574631473..574633225

Molecular Weight (calculated)

47641.4 Da

IEP (calculated)

10.712

GRAVY (calculated)

-0.655

Length

437 amino acids

Sequence
(BLAST)

001: MGKAARWLRS ILAGKKDGGR RGGKRGQAQC DSTPLAELPA AASPREKRRW SFRRPAAAVK TAAGPSPLAQ EAGGLSVTVS ERELEQSKRA VAVAMATAAA
101: ADAAVIRLTP PEAEDDLNLY ATPVQEAAAA RIQATFRGYL ARKALCALRG LVKLQALIRG HLVRKQARAT LRRMQALLMA QNRVRAQRMR MLEEEDHAAA
201: PVDRRSPQHP RRRRSYEMDR SGEEHAKIVE MDMGEPPRRG RSSCSVAASE PWSRERRRAE CYGPGHGQCS PAPSAAFTEI TTPRAYSGHF EDFEPATARV
301: SAYVPAGYAD EGESASEFCP NYMANTQSSR AKARSQSAPK QRPDSPSPLE RQPSRRRGGP APLPRSVKMQ RSSSHVGVPS SAAAMYAQYY PWAVKLDRSS
401: ASLHESECGS TSSVLTAATT VGYSRSMVGF EVHRNQY

Best Arabidopsis Sequence Match ( AT4G14750.2 )
(BLAST)

001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVQ GNNNMY

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.