Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G381100.1 | Wheat | cytosol, mitochondrion | 97.19 | 97.4 |
| HORVU5Hr1G093430.4 | Barley | cytosol | 96.76 | 95.73 |
| TraesCS5A01G377500.1 | Wheat | cytosol | 95.25 | 95.45 |
| Os03t0636700-00 | Rice | mitochondrion | 69.98 | 72.48 |
| Zm00001d033280_P001 | Maize | cytosol, mitochondrion | 69.98 | 68.5 |
| EER93770 | Sorghum | cytosol, mitochondrion | 71.71 | 67.76 |
| GSMUA_Achr3P14930_001 | Banana | cytosol | 40.6 | 49.6 |
| GSMUA_Achr8P26800_001 | Banana | cytosol | 39.52 | 48.93 |
| CDY50677 | Canola | nucleus | 36.5 | 45.92 |
| Bra039715.1-P | Field mustard | nucleus, plastid | 36.5 | 45.68 |
| CDY36861 | Canola | nucleus | 36.72 | 45.45 |
| VIT_05s0020g03980.t01 | Wine grape | cytosol | 43.63 | 43.53 |
| TraesCS2D01G470000.1 | Wheat | cytosol, mitochondrion | 40.82 | 43.25 |
| KRH35475 | Soybean | cytosol | 42.76 | 42.22 |
| CDY29768 | Canola | cytosol | 15.12 | 41.92 |
| Bra036898.1-P | Field mustard | cytosol | 33.05 | 41.8 |
| KRH69109 | Soybean | nucleus | 37.37 | 41.49 |
| KRG91354 | Soybean | cytosol, plastid | 41.68 | 41.24 |
| KRH31669 | Soybean | cytosol, mitochondrion | 36.93 | 40.43 |
| CDY64325 | Canola | cytosol | 32.4 | 40.21 |
| TraesCS4D01G275700.3 | Wheat | cytosol, mitochondrion | 39.74 | 38.1 |
| AT4G14750.3 | Thale cress | cytosol | 36.07 | 36.3 |
| VIT_14s0030g01880.t01 | Wine grape | nucleus | 26.57 | 31.46 |
| TraesCS2D01G398300.1 | Wheat | cytosol, mitochondrion | 30.67 | 30.74 |
| TraesCS1D01G123800.1 | Wheat | cytosol | 28.08 | 28.63 |
| TraesCS3D01G109900.1 | Wheat | cytosol, mitochondrion | 28.51 | 28.63 |
| TraesCS1D01G344200.1 | Wheat | cytosol | 21.38 | 28.61 |
| KRH68719 | Soybean | cytosol | 22.03 | 27.27 |
| KRG96957 | Soybean | cytosol | 21.17 | 26.49 |
| TraesCS3D01G275900.1 | Wheat | mitochondrion | 20.95 | 25.53 |
| TraesCS5D01G168000.2 | Wheat | nucleus | 22.89 | 22.08 |
| TraesCS7D01G341000.1 | Wheat | cytosol | 19.44 | 20.32 |
| TraesCS1D01G361800.3 | Wheat | cytosol, mitochondrion, plastid | 18.14 | 14.51 |
| TraesCS3D01G247300.1 | Wheat | cytosol, plastid | 15.98 | 13.5 |
| TraesCS4D01G327500.1 | Wheat | mitochondrion | 11.23 | 13.1 |
| TraesCS2D01G492600.1 | Wheat | nucleus | 19.87 | 10.69 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G387500.1 | EnsemblPlantsGene:TraesCS5D01G387500 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF37 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr5D:-:457007041..457008955
Molecular Weight (calculated)
49556.7 Da
IEP (calculated)
11.036
GRAVY (calculated)
-0.506
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKAGRWLRS FLPGKKDRGK DAGNHKTGPE ETPRWVPAWT PQTVTPASTP GAKEKRRWSF RRPATAVAAG AGKDGAFLEP RVLDPDQSAI AVAIATAAAA
101: EAAVAAKQAA AAVVRYAASA PGSKRAVIGI EEAAAIKIQS VFKSYLARKA LCALRGLVKL QALVRGHLVR RQASNTLRCM QALVAAQNRA RTARLRLLDD
201: VERPLRTPRM TPTRRSPHHP RLRQHQEMEE NIKIVEVDTG AGDVRCTPRT SRRSSCYATP LCRTPSKVEL YQKVSPTPSA LTDASGRSYS GRYEDFSFGT
301: ARASPYHYYY ASDASCKQPP PPQQQGHGAG AGADHPLLFP SYMANTQSSR AKARSQSAPR QRASVSSAPE VASPWERQAS AGRRRASLEG PAQAAARGLA
401: SPKGAVRVQR CQSQASAACP WGVRLDMSSA SVHDSECGST STMRTAATSM YCWSAAANST GVA
101: EAAVAAKQAA AAVVRYAASA PGSKRAVIGI EEAAAIKIQS VFKSYLARKA LCALRGLVKL QALVRGHLVR RQASNTLRCM QALVAAQNRA RTARLRLLDD
201: VERPLRTPRM TPTRRSPHHP RLRQHQEMEE NIKIVEVDTG AGDVRCTPRT SRRSSCYATP LCRTPSKVEL YQKVSPTPSA LTDASGRSYS GRYEDFSFGT
301: ARASPYHYYY ASDASCKQPP PPQQQGHGAG AGADHPLLFP SYMANTQSSR AKARSQSAPR QRASVSSAPE VASPWERQAS AGRRRASLEG PAQAAARGLA
401: SPKGAVRVQR CQSQASAACP WGVRLDMSSA SVHDSECGST STMRTAATSM YCWSAAANST GVA
001: MGKTSKWFRS LLTGKKERTK EHIIQSECVF TSSIPGTPKE KRRWSFRRSS ATGPPPPACA ITLKDSPPPP PPPPPPPPLQ QPFVVEIVDN EDEQIKNVSA
101: EEIEEFAAIK IQACYRSHLA RKALRALKGL VKLQALVRGH LVRKQATATL RCMQALITLQ AKAREQRIRM IGGDSTNPRT SIHKTRINNF YHENEENIKI
201: VEMDIQSKMY SPAPSALTEM SPRAYSSHFE DCNSFNTAQS SPQCFSRFKE YYNGDTLSSY DYPLFPNYMA NTQSSKAKAR SQSAPKQRPP EIYEKQMSGR
301: RRSSMEAPRN NGVPRAVRMQ RSSSQLGSNT AKESQQHHHH QYYPWMAIKL DRSNISLMES ECGSTSTVMT NTNYGRHVDV QGNNNMY
101: EEIEEFAAIK IQACYRSHLA RKALRALKGL VKLQALVRGH LVRKQATATL RCMQALITLQ AKAREQRIRM IGGDSTNPRT SIHKTRINNF YHENEENIKI
201: VEMDIQSKMY SPAPSALTEM SPRAYSSHFE DCNSFNTAQS SPQCFSRFKE YYNGDTLSSY DYPLFPNYMA NTQSSKAKAR SQSAPKQRPP EIYEKQMSGR
301: RRSSMEAPRN NGVPRAVRMQ RSSSQLGSNT AKESQQHHHH QYYPWMAIKL DRSNISLMES ECGSTSTVMT NTNYGRHVDV QGNNNMY
Arabidopsis Description
IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.