CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35475	Soybean	cytosol	90.81	90.62
KRH69109	Soybean	nucleus	59.4	66.67
KRH31669	Soybean	cytosol, mitochondrion	58.97	65.25
VIT_05s0020g03980.t01	Wine grape	cytosol	64.53	65.09
GSMUA_Achr3P14930_001	Banana	cytosol	49.15	60.69
GSMUA_Achr8P26800_001	Banana	cytosol	47.86	59.89
Os03t0636700-00	Rice	mitochondrion	41.45	43.4
TraesCS5A01G377500.1	Wheat	cytosol	41.67	42.21
Zm00001d033280_P001	Maize	cytosol, mitochondrion	42.52	42.07
TraesCS5B01G381100.1	Wheat	cytosol, mitochondrion	41.45	41.99
TraesCS5D01G387500.1	Wheat	cytosol	41.24	41.68
HORVU5Hr1G093430.4	Barley	cytosol	41.03	41.03
EER93770	Sorghum	cytosol, mitochondrion	42.95	41.02
TraesCSU01G074100.1	Wheat	cytosol, mitochondrion	31.62	37.19
KRH47199	Soybean	cytosol	31.2	36.87
KRH44268	Soybean	cytosol	31.2	36.32
KRH48993	Soybean	plastid	7.26	36.17
TraesCS5A01G055100.1	Wheat	cytosol, mitochondrion	30.34	35.32
KRH74242	Soybean	cytosol, mitochondrion	30.77	34.29
Zm00001d041437_P001	Maize	cytosol, mitochondrion	32.05	33.86
Os12t0604500-00	Rice	cytosol	31.62	33.18
KRH60203	Soybean	cytosol, mitochondrion	25.0	32.5
KRH07958	Soybean	mitochondrion	9.62	31.91
KRH41488	Soybean	cytosol, mitochondrion	29.7	31.88
OQU79535	Sorghum	cytosol, mitochondrion	30.56	30.89
KRH03972	Soybean	cytosol	29.49	30.87
KRH23382	Soybean	cytosol	24.57	30.26
KRH48992	Soybean	endoplasmic reticulum	21.79	30.18
KRH09951	Soybean	cytosol	24.36	30.16
KRG96957	Soybean	cytosol	23.5	29.73
KRH09113	Soybean	cytosol	29.91	29.35
KRH38565	Soybean	cytosol	30.13	29.25
KRH77498	Soybean	cytosol, mitochondrion	24.57	29.04
KRG91452	Soybean	cytosol	28.21	28.95
KRH57246	Soybean	cytosol	27.35	28.76
KRH35361	Soybean	cytosol, mitochondrion	28.42	28.66
KRH68719	Soybean	cytosol	22.65	28.34
KRH23930	Soybean	nucleus	26.5	26.96
KRH39865	Soybean	nucleus	26.71	26.65
KRH33197	Soybean	cytosol, mitochondrion	21.58	25.9
KRH29958	Soybean	cytosol, mitochondrion	24.57	25.16
KRH63082	Soybean	cytosol	23.5	24.44
KRH56937	Soybean	cytosol	22.22	17.75
KRH03447	Soybean	nucleus	21.58	17.18
KRH63392	Soybean	cytosol	21.37	17.15
KRH54515	Soybean	cytosol	20.94	16.78
KRG99144	Soybean	cytosol, plastid	19.23	16.45
KRH45861	Soybean	plastid	18.8	16.09
KRH74806	Soybean	cytosol, plastid	17.95	14.92
KRH69321	Soybean	cytosol, mitochondrion	17.31	14.39
KRH51729	Soybean	cytosol	21.15	11.66
KRH61064	Soybean	nucleus	10.68	6.88

Protein Annotations

EMBL:ACUP02012677	EnsemblPlants:KRG91354	EnsemblPlantsGene:GLYMA_20G149600	EntrezGene:100814342	Gene3D:1.20.5.190	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295
PANTHER:PTHR32295:SF45	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:KRG91354	ProteinID:KRG91354.1
SEG:seg	SMART:SM00015	UniParc:UPI0001BA913B	UniProt:I1NGJ2	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr20:-:38808998..38812025

Molecular Weight (calculated)

51648.3 Da

IEP (calculated)

10.274

GRAVY (calculated)

-0.757

Length

468 amino acids

Sequence
(BLAST)

001: MGKTGKWLRN LLTTGKKDKE KEKSTIKLNS SSNGTENSTT PTSSTPKEKK RWSFRRSSAS ATATTATTTP TTTSKELNFV ETNVTASQTV QTDTDIQNEQ
101: RKHVMAVAAA TAAAADAAVA AAQAVAAVIR LTSTSNATSK SIEEAAAIKI QSAFRSHLAK KALCALRGLV KLQALVRGHL VRKQAKATLR CMQALVTAQA
201: RARAQRIQMG SEGKANQKHR NAAEDDLLRH IYNEMDRGLE DNIKIVEMDV CESKVNSRSS SVYHHGHQEQ YDNRFSTHYS TNGSYTKEEK YKVSPAPSAL
301: TESSPRACSG HFDDCFSTAQ SSPHPQFYSA VSRSEDSKHP FAFHRPAYAE SMSYDYPLFP NYMANTESSR AKVRSHSAPK QRPDSFERQP SRRRASVEGR
401: NVPRPMRMQR SSSHVGATVH NYHYPWSIKL DRSAVSLKDS ECGSTSTVLT NTNYCRSLVA YGSRGDGY

Best Arabidopsis Sequence Match ( AT4G14750.1 )
(BLAST)

001: MGKTSKWFRS LLTGKKERTK EHIIQSECVF TSSIPGTPKE KRRWSFRRSS ATGPPPPACA ITLKDSPPPP PPPPPPPPLQ QPFVVEIVDN EDEQIKNVSA
101: EEIEEFAAIK IQACYRSHLA RKALRALKGL VKLQALVRGH LVRKQATATL RCMQALITLQ AKAREQRIRM IGGDSTNPRT SIHKTRINNF YHENEENIKI
201: VEMDIQSKMY SPAPSALTEM SPRAYSSHFE DCNSFNTAQS SPQCFSRFKE YYNGDTLSSY DYPLFPNYMA NTQSSKAKAR SQSAPKQRPP EIYEKQMSGR
301: RRSSMEAPRN NGVPRAVRMQ RSSSQLGSNT AKESQQHHHH QYYPWMAIKL DRSNISLMES ECGSTSTVMT NTNYGRHVDV QGNNNMY

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.