CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03972	Soybean	cytosol	91.46	91.05
KRH77498	Soybean	cytosol, mitochondrion	52.81	59.34
VIT_02s0025g04120.t01	Wine grape	mitochondrion	57.53	51.82
GSMUA_Achr8P11920_001	Banana	cytosol	40.22	49.86
Solyc08g080470.2.1	Tomato	plastid	51.69	46.09
PGSC0003DMT400007855	Potato	cytosol, plastid	51.69	46.0
EES12687	Sorghum	cytosol, mitochondrion	46.29	44.11
Solyc08g007920.1.1	Tomato	cytosol	22.92	43.59
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	44.94	43.57
Zm00001d002630_P002	Maize	mitochondrion	44.49	43.33
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	44.49	43.04
TraesCS2D01G398300.1	Wheat	cytosol, mitochondrion	44.49	42.86
Os04t0569900-01	Rice	cytosol, mitochondrion	44.27	42.46
HORVU0Hr1G005320.2	Barley	cytosol	34.38	42.03
Solyc08g007930.1.1	Tomato	cytosol	21.35	41.85
CDX98787	Canola	mitochondrion	27.42	41.22
CDY41368	Canola	mitochondrion, plastid	38.88	41.19
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	40.22	40.87
Bra020822.1-P	Field mustard	mitochondrion, plastid	38.43	40.71
CDX76341	Canola	mitochondrion, plastid	38.43	40.71
PGSC0003DMT400014796	Potato	cytosol	32.81	40.56
CDY53133	Canola	nucleus	44.04	40.33
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	38.88	40.33
CDY41252	Canola	cytosol, mitochondrion	44.04	40.16
Zm00001d026084_P001	Maize	mitochondrion	44.72	40.12
Bra013672.1-P	Field mustard	mitochondrion, nucleus	44.27	39.72
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	37.3	39.24
CDX98786	Canola	nucleus	41.8	39.16
AT4G23060.1	Thale cress	mitochondrion, nucleus	42.47	39.05
Bra019337.1-P	Field mustard	nucleus	40.9	38.64
CDX94150	Canola	nucleus	40.22	38.58
KRH48993	Soybean	plastid	8.09	38.3
KRH09113	Soybean	cytosol	39.55	36.9
KRG91452	Soybean	cytosol	37.53	36.62
KRH35361	Soybean	cytosol, mitochondrion	37.3	35.78
KRH38565	Soybean	cytosol	38.2	35.27
KRH47199	Soybean	cytosol	31.01	34.85
KRH44268	Soybean	cytosol	30.34	33.58
KRH23382	Soybean	cytosol	27.19	31.84
KRH09951	Soybean	cytosol	26.97	31.75
KRH74242	Soybean	cytosol, mitochondrion	29.21	30.95
KRH60203	Soybean	cytosol, mitochondrion	24.72	30.56
KRH41488	Soybean	cytosol, mitochondrion	28.99	29.59
KRH48992	Soybean	endoplasmic reticulum	21.35	28.11
KRH35475	Soybean	cytosol	29.21	27.72
KRG91354	Soybean	cytosol, plastid	28.76	27.35
KRH07958	Soybean	mitochondrion	8.31	26.24
KRH23930	Soybean	nucleus	25.62	24.78
KRH68719	Soybean	cytosol	20.45	24.33
KRG96957	Soybean	cytosol	20.22	24.32
KRH39865	Soybean	nucleus	25.17	23.88
KRH33197	Soybean	cytosol, mitochondrion	20.67	23.59
KRH69109	Soybean	nucleus	20.67	22.06
KRH31669	Soybean	cytosol, mitochondrion	20.67	21.75
KRH29958	Soybean	cytosol, mitochondrion	22.02	21.44
KRH63082	Soybean	cytosol	21.57	21.33
KRH63392	Soybean	cytosol	22.92	17.5
KRG99144	Soybean	cytosol, plastid	21.35	17.37
KRH56937	Soybean	cytosol	22.47	17.06
KRH03447	Soybean	nucleus	22.25	16.84
KRH54515	Soybean	cytosol	22.02	16.78
KRH45861	Soybean	plastid	20.45	16.64
KRH74806	Soybean	cytosol, plastid	18.2	14.39
KRH69321	Soybean	cytosol, mitochondrion	17.75	14.03
KRH51729	Soybean	cytosol	22.7	11.9
KRH61064	Soybean	nucleus	13.26	8.12

Protein Annotations

Gene3D:1.20.5.190	EntrezGene:100793587	MapMan:35.2	EMBL:ACUP02002822	InterPro:DUF4005	EnsemblPlantsGene:GLYMA_05G049000
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	UniProt:K7KMX3
EnsemblPlants:KRH57246	ProteinID:KRH57246	ProteinID:KRH57246.1	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF13178
PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF13	SUPFAM:SSF52540	UniParc:UPI000233A107	SEG:seg

Description

hypothetical protein

Coordinates

chr5:-:4359186..4362640

Molecular Weight (calculated)

48923.6 Da

IEP (calculated)

10.594

GRAVY (calculated)

-0.741

Length

445 amino acids

Sequence
(BLAST)

001: MGKATKWFRG FFGLKKTEYT APPAKPPKEK RRWSFVKSYT EKDNTTAATC PPQRNNNNHA MAVAAATAAV AEAAVAAAEA AAVVVRLTSS SGRCADAGPT
101: RIRQHWAAVR IQAAFRGCLA RRALRALKGL VKLQALVRGH IERKRTAEWL KRVQVLLHAQ PQVSAGLILH ASPSGSKLSS HLHGPETPEK FESPIRSKSM
201: KHEHSPILKR NGSKSCVQIN GYQEMCGSRS ESQVNEQSWN SGRSLNRTYS SNDERNDRVL EVDSGKPHFT IKRKNLSFST GSDLYSKSLN STKESTSLQS
301: GQSSCCEVQS HSYTSQKVNE VEESPFCTAD NSPQYLSATS KDGGFKRSPF TPTKSDGSRS YIRGYPDYPS YMACTESSKA KARSLSAPKQ RPQSEKSGSS
401: NRYSLNGFDM SRLATQRAMQ ASFTNKAYPG SGRLDKLGMP VGYRF

Best Arabidopsis Sequence Match ( AT4G23060.1 )
(BLAST)

001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY

Arabidopsis Description

IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.