Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU6Hr1G069310.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G62070.1 | HORVU6Hr1G069310.1 | AT3G27960.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G418900.1 | Wheat | cytosol, mitochondrion | 96.15 | 76.09 |
| TraesCS2D01G398300.1 | Wheat | cytosol, mitochondrion | 96.43 | 75.97 |
| EES12687 | Sorghum | cytosol, mitochondrion | 83.52 | 65.1 |
| Zm00001d002630_P002 | Maize | mitochondrion | 81.59 | 64.99 |
| Os04t0569900-01 | Rice | cytosol, mitochondrion | 81.04 | 63.58 |
| Zm00001d026084_P001 | Maize | mitochondrion | 79.4 | 58.27 |
| GSMUA_Achr5P13660_001 | Banana | cytosol, mitochondrion | 53.85 | 44.75 |
| GSMUA_Achr3P18210_001 | Banana | cytosol, mitochondrion | 50.82 | 43.12 |
| VIT_02s0025g04120.t01 | Wine grape | mitochondrion | 51.65 | 38.06 |
| CDX98787 | Canola | mitochondrion | 30.22 | 37.16 |
| KRH77498 | Soybean | cytosol, mitochondrion | 39.56 | 36.36 |
| Solyc08g007920.1.1 | Tomato | cytosol | 22.8 | 35.47 |
| VIT_16s0100g00620.t01 | Wine grape | cytosol | 32.42 | 35.44 |
| Solyc08g007930.1.1 | Tomato | cytosol | 21.7 | 34.8 |
| Solyc08g080470.2.1 | Tomato | plastid | 47.53 | 34.67 |
| KRH57246 | Soybean | cytosol | 42.03 | 34.38 |
| PGSC0003DMT400007855 | Potato | cytosol, plastid | 46.7 | 34.0 |
| KRH03972 | Soybean | cytosol | 41.48 | 33.78 |
| CDX78285 | Canola | plastid | 29.95 | 31.69 |
| Bra005929.1-P | Field mustard | plastid | 29.67 | 31.49 |
| PGSC0003DMT400014796 | Potato | cytosol | 31.04 | 31.39 |
| KRG91452 | Soybean | cytosol | 38.74 | 30.92 |
| CDX98994 | Canola | mitochondrion | 29.67 | 30.51 |
| CDX70019 | Canola | cytosol, mitochondrion | 29.67 | 30.51 |
| Bra009281.1-P | Field mustard | mitochondrion | 29.67 | 30.51 |
| KRH09113 | Soybean | cytosol | 39.84 | 30.4 |
| KRH35361 | Soybean | cytosol, mitochondrion | 38.46 | 30.17 |
| PGSC0003DMT400037043 | Potato | mitochondrion, nucleus | 39.29 | 30.04 |
| KRH38565 | Soybean | cytosol | 39.29 | 29.67 |
| CDY53133 | Canola | nucleus | 38.74 | 29.01 |
| Solyc03g026110.2.1 | Tomato | cytosol, mitochondrion | 38.46 | 28.81 |
| CDY41252 | Canola | cytosol, mitochondrion | 38.19 | 28.48 |
| CDX81042 | Canola | plastid | 30.22 | 28.42 |
| CDY41368 | Canola | mitochondrion, plastid | 32.69 | 28.33 |
| Bra019337.1-P | Field mustard | nucleus | 36.54 | 28.24 |
| CDX86928 | Canola | mitochondrion, plastid | 30.49 | 28.17 |
| CDY00253 | Canola | plastid | 30.49 | 28.17 |
| CDX76341 | Canola | mitochondrion, plastid | 32.42 | 28.1 |
| Bra020822.1-P | Field mustard | mitochondrion, plastid | 32.42 | 28.1 |
| AT5G62070.1 | Thale cress | cytosol, plastid | 31.04 | 28.04 |
| Bra013672.1-P | Field mustard | mitochondrion, nucleus | 37.91 | 27.82 |
| Bra010055.1-P | Field mustard | plastid | 30.77 | 27.65 |
| CDX94150 | Canola | nucleus | 34.89 | 27.37 |
| CDX98786 | Canola | nucleus | 35.71 | 27.37 |
| CDY00251 | Canola | plastid | 30.77 | 27.25 |
| AT4G23060.1 | Thale cress | mitochondrion, nucleus | 35.99 | 27.07 |
| AT5G07240.2 | Thale cress | plastid | 29.95 | 24.38 |
| HORVU2Hr1G106550.2 | Barley | mitochondrion | 28.3 | 23.73 |
| HORVU3Hr1G070750.1 | Barley | mitochondrion | 15.66 | 22.8 |
| HORVU4Hr1G073480.2 | Barley | cytosol, mitochondrion | 28.3 | 22.64 |
| HORVU3Hr1G070760.1 | Barley | mitochondrion | 22.8 | 21.9 |
| HORVU5Hr1G093430.4 | Barley | cytosol | 28.02 | 21.79 |
| HORVU4Hr1G056380.1 | Barley | cytosol, mitochondrion | 19.78 | 21.56 |
| HORVU6Hr1G003870.1 | Barley | cytosol, mitochondrion | 17.58 | 20.78 |
| HORVU1Hr1G028250.6 | Barley | mitochondrion | 26.92 | 18.6 |
| HORVU3Hr1G019630.3 | Barley | endoplasmic reticulum, plastid | 28.85 | 18.32 |
| HORVU7Hr1G082120.1 | Barley | cytosol | 21.43 | 17.93 |
| HORVU1Hr1G075880.4 | Barley | cytosol | 16.48 | 17.39 |
| HORVU2Hr1G106540.1 | Barley | cytosol, nucleus | 14.01 | 16.89 |
| HORVU5Hr1G050840.5 | Barley | cytosol, plastid | 23.9 | 15.65 |
| HORVU3Hr1G067750.8 | Barley | cytosol, plastid | 23.35 | 15.29 |
| HORVU1Hr1G080360.4 | Barley | mitochondrion | 24.73 | 15.28 |
| HORVU2Hr1G109850.3 | Barley | nucleus | 23.08 | 11.75 |
| HORVU4Hr1G081190.1 | Barley | mitochondrion | 11.81 | 11.05 |
| HORVU2Hr1G124440.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G005320.2 | EnsemblPlantsGene:HORVU0Hr1G005320 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF52 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | SEG:seg | SMART:SM00015 | UniParc:UPI000B47EF98 | UniProt:A0A287DW86 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchrUn:-:29768493..29771149
Molecular Weight (calculated)
39443.3 Da
IEP (calculated)
11.092
GRAVY (calculated)
-0.829
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: VRLTSSGRCP PAGAKHEEWA AVRIQAAFRG YLARRALKAL RGLVKLQALV RGNIVRRQAA ETLRCMQALV SVQPRARASR ATRSRQAAAH PGATTPEKYE
101: QAAYDGPLRH GRSGSLKGGS SKTPGSERMS RERSESCGRN WLDRWVEERY MDDEKNAKIL EVDPGKPGRH AASKRRGSGG GHHHQSSCST RTSEQNSRSY
201: ATMPDSPSRD STTAQQSVPS PSSVGMGMGA GEALSPLRMP ADTAAELYES PQFFSATSRP GSSKRGAFFT PTKSECARSL FGGYSDYPNY MSNTESFRAK
301: ARSQSAPKQR PLYEKSGSLR KASAHAFAPG AAGQRSSSSL HAKFTNKAYP GSGRLDRLGM PVKY
101: QAAYDGPLRH GRSGSLKGGS SKTPGSERMS RERSESCGRN WLDRWVEERY MDDEKNAKIL EVDPGKPGRH AASKRRGSGG GHHHQSSCST RTSEQNSRSY
201: ATMPDSPSRD STTAQQSVPS PSSVGMGMGA GEALSPLRMP ADTAAELYES PQFFSATSRP GSSKRGAFFT PTKSECARSL FGGYSDYPNY MSNTESFRAK
301: ARSQSAPKQR PLYEKSGSLR KASAHAFAPG AAGQRSSSSL HAKFTNKAYP GSGRLDRLGM PVKY
001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY
Arabidopsis Description
IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.