Factsheet for HORVU3Hr1G070760.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G070750.1	Barley	mitochondrion	63.59	96.4
TraesCS3B01G309600.1	Wheat	mitochondrion	91.56	92.04
TraesCS3A01G275900.1	Wheat	mitochondrion	90.77	91.98
TraesCS3D01G275900.1	Wheat	mitochondrion	92.08	91.84
Zm00001d012767_P001	Maize	cytosol, mitochondrion	47.49	55.05
KXG33342	Sorghum	mitochondrion	56.99	54.55
Zm00001d043510_P001	Maize	mitochondrion, nucleus	53.03	49.02
HORVU1Hr1G075880.4	Barley	cytosol	33.51	36.81
Os01t0743100-00	Rice	cytosol, mitochondrion	40.9	36.3
HORVU4Hr1G073480.2	Barley	cytosol, mitochondrion	27.97	23.3
HORVU2Hr1G106550.2	Barley	mitochondrion	26.39	23.04
HORVU0Hr1G005320.2	Barley	cytosol	21.9	22.8
HORVU4Hr1G056380.1	Barley	cytosol, mitochondrion	19.79	22.46
HORVU5Hr1G093430.4	Barley	cytosol	26.91	21.79
HORVU6Hr1G003870.1	Barley	cytosol, mitochondrion	17.68	21.75
HORVU1Hr1G028250.6	Barley	mitochondrion	30.08	21.63
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	30.08	19.9
HORVU7Hr1G082120.1	Barley	cytosol	19.0	16.55
HORVU5Hr1G050840.5	Barley	cytosol, plastid	22.43	15.29
HORVU2Hr1G106540.1	Barley	cytosol, nucleus	11.61	14.57
HORVU1Hr1G080360.4	Barley	mitochondrion	21.11	13.58
HORVU3Hr1G067750.8	Barley	cytosol, plastid	19.0	12.95
HORVU4Hr1G081190.1	Barley	mitochondrion	13.19	12.85
HORVU2Hr1G109850.3	Barley	nucleus	16.09	8.53
HORVU2Hr1G124440.1	Barley	cytosol	0.26	1.64

Protein Annotations

Gene3D:1.20.5.190	MapMan:35.2	EMBL:AK376598	InterPro:DUF4005	UniProt:F2EKC1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU3Hr1G070760	EnsemblPlants:HORVU3Hr1G070760.1	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS
InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF17
SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI00020091D7	SEG:seg	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EKC1]

Coordinates

chrchr3H:+:534850930..534853675

Molecular Weight (calculated)

42270.4 Da

IEP (calculated)

11.484

GRAVY (calculated)

-0.779

Length

379 amino acids

Sequence
(BLAST)

001: MGRAMRWLKR LLTGRKEAHG GGKDIHAAPD WHDTAAVKES TKRWSFVKQR KSGVDAGKRP SEAIAAALEP SRVKPCRCAG GEQVGAREET AAVLIQKAFR
101: GYLARKALRA LRSLVKLQAL VRGYLVRKQA ATTLHRLQAL MRLQADSRAF KSASYRKSME QERIIAQDAR MRTPPAKPGH RRRLSDSTDS NYERSPRIVE
201: MDTCHLRSRS SRIVSGRYAA DRSSGRLTPD LAPPISPRSV KQPPRVSTRR EREPVRHAKT AQNTPRFSGP DAPYAYDSPA KSVDGLAARP LWHRDLLASP
301: RYMAGTASSA ARLRCQSAPR QPAEAPRASL TQRDAVPRKS TCTRTQHGGL CFHSSDATRA RCSDLSDDAA RDYYLDRMW

Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Arabidopsis Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.