Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G106550.2 | Barley | mitochondrion | 77.15 | 53.69 |
| PGSC0003DMT400016500 | Potato | nucleus | 32.12 | 36.47 |
| HORVU6Hr1G003870.1 | Barley | cytosol, mitochondrion | 27.81 | 27.27 |
| HORVU4Hr1G056380.1 | Barley | cytosol, mitochondrion | 29.47 | 26.65 |
| HORVU4Hr1G073480.2 | Barley | cytosol, mitochondrion | 38.41 | 25.49 |
| Solyc09g082560.2.1 | Tomato | nucleus | 37.09 | 23.98 |
| GSMUA_Achr4P21190_001 | Banana | cytosol | 14.57 | 21.89 |
| HORVU5Hr1G093430.4 | Barley | cytosol | 33.77 | 21.79 |
| HORVU0Hr1G005320.2 | Barley | cytosol | 16.89 | 14.01 |
| HORVU3Hr1G070760.1 | Barley | mitochondrion | 14.57 | 11.61 |
| HORVU1Hr1G028250.6 | Barley | mitochondrion | 19.21 | 11.01 |
| HORVU7Hr1G082120.1 | Barley | cytosol | 15.23 | 10.57 |
| HORVU3Hr1G019630.3 | Barley | endoplasmic reticulum, plastid | 18.54 | 9.77 |
| HORVU5Hr1G050840.5 | Barley | cytosol, plastid | 17.22 | 9.35 |
| HORVU1Hr1G075880.4 | Barley | cytosol | 9.6 | 8.41 |
| HORVU1Hr1G080360.4 | Barley | mitochondrion | 15.56 | 7.98 |
| HORVU3Hr1G070750.1 | Barley | mitochondrion | 5.3 | 6.4 |
| HORVU2Hr1G109850.3 | Barley | nucleus | 13.91 | 5.87 |
| HORVU3Hr1G067750.8 | Barley | cytosol, plastid | 10.6 | 5.76 |
| HORVU4Hr1G081190.1 | Barley | mitochondrion | 3.64 | 2.83 |
| HORVU2Hr1G124440.1 | Barley | cytosol | 0.33 | 1.64 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G106540.1 | EnsemblPlantsGene:HORVU2Hr1G106540 | InterPro:DUF4005 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF45 | PFAM:PF13178 |
| SEG:seg | UniParc:UPI000B4821E2 | UniProt:A0A287JBU4 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr2H:-:709697147..709698556
Molecular Weight (calculated)
32121.9 Da
IEP (calculated)
9.519
GRAVY (calculated)
-0.855
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: YLGAHVEEGS LRTEGAGEAA SADQGSPGEE AGQGHAPTHA GPPHGADPRA RAAHAHARGR RPRRRCPCGP PVAAAPTAAP LLRDGQVRRG ACQDRRDGHG
101: EPPRRGRSSC SVAASEPWSR EGRRADYYGP GQCSPAPSAA FTEITSPRAY SGRFEDFEPA TARVSAYVPA GYAADEGESA SEFFPNYMAN TQSSRAKARS
201: QSAPKQRPDS PSPLERQPSR RRGGPAPLPR SVKMQRSSSH VGVPCSAAAT YAHYYPWPVK LDRSSASLHE SECGSTSSIL TASTTVGYSR SMVGFEVHRN
301: QY
101: EPPRRGRSSC SVAASEPWSR EGRRADYYGP GQCSPAPSAA FTEITSPRAY SGRFEDFEPA TARVSAYVPA GYAADEGESA SEFFPNYMAN TQSSRAKARS
201: QSAPKQRPDS PSPLERQPSR RRGGPAPLPR SVKMQRSSSH VGVPCSAAAT YAHYYPWPVK LDRSSASLHE SECGSTSSIL TASTTVGYSR SMVGFEVHRN
301: QY
001: MGKTSKWFRS LLTGKKERTK EHIIQSECVF TSSIPGTPKE KRRWSFRRSS ATGPPPPACA ITLKDSPPPP PPPPPPPPLQ QPFVVEIVDN EDEQIKNVSA
101: EEIEEFAAIK IQACYRSHLA RKALRALKGL VKLQALVRGH LVRKQATATL RCMQALITLQ AKAREQRIRM IGGDSTNPRT SIHKTRINNF YHENEENIKI
201: VEMDIQSKMY SPAPSALTEM SPRAYSSHFE DCNSFNTAQS SPQCFSRFKE YYNGDTLSSY DYPLFPNYMA NTQSSKAKAR SQSAPKQRPP EIYEKQMSGR
301: RRSSMEAPRN NGVPRAVRMQ RSSSQLGSNT AKESQQHHHH QYYPWMAIKL DRSNISLMES ECGSTSTVMT NTNYGRHVDV QGNNNMY
101: EEIEEFAAIK IQACYRSHLA RKALRALKGL VKLQALVRGH LVRKQATATL RCMQALITLQ AKAREQRIRM IGGDSTNPRT SIHKTRINNF YHENEENIKI
201: VEMDIQSKMY SPAPSALTEM SPRAYSSHFE DCNSFNTAQS SPQCFSRFKE YYNGDTLSSY DYPLFPNYMA NTQSSKAKAR SQSAPKQRPP EIYEKQMSGR
301: RRSSMEAPRN NGVPRAVRMQ RSSSQLGSNT AKESQQHHHH QYYPWMAIKL DRSNISLMES ECGSTSTVMT NTNYGRHVDV QGNNNMY
Arabidopsis Description
IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.