Factsheet for HORVU1Hr1G028250.6

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G122900.1	Wheat	cytosol, plastid	82.73	96.04
TraesCS1D01G123800.1	Wheat	cytosol	82.73	96.04
TraesCS1B01G142100.1	Wheat	cytosol	82.54	95.81
Os05t0187500-01	Rice	cytosol	69.83	78.3
Zm00001d037688_P001	Maize	mitochondrion	62.62	71.43
KXG21487	Sorghum	cytosol, mitochondrion	65.46	69.98
Zm00001d010366_P001	Maize	cytosol, mitochondrion	61.1	68.66
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	63.95	58.81
KRH48993	Soybean	plastid	10.44	58.51
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	41.18	57.87
GSMUA_Achr10P...	Banana	cytosol	46.49	55.56
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	42.13	54.95
VIT_09s0002g03360.t01	Wine grape	cytosol, mitochondrion	40.23	52.74
VIT_11s0016g03030.t01	Wine grape	cytosol	43.07	52.18
Solyc06g066430.2.1	Tomato	nucleus	38.52	51.79
KRH47199	Soybean	cytosol	38.9	51.77
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	39.28	50.99
KRH44268	Soybean	cytosol	38.71	50.75
KRH74242	Soybean	cytosol, mitochondrion	40.42	50.71
GSMUA_AchrUn_...	Banana	cytosol	36.24	50.4
CDY43103	Canola	cytosol	33.97	48.64
CDY68636	Canola	cytosol	35.48	48.07
CDX75883	Canola	cytosol	34.16	48.0
Bra001633.1-P	Field mustard	cytosol	33.97	47.99
Bra021181.1-P	Field mustard	cytosol	35.29	47.81
KRH60203	Soybean	cytosol, mitochondrion	32.64	47.78
CDX82400	Canola	cytosol	33.78	47.72
Solyc12g008520.1.1	Tomato	cytosol	37.0	47.68
Bra022163.1-P	Field mustard	cytosol	34.91	47.55
CDX92076	Canola	cytosol	34.91	47.55
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	36.05	47.5
AT3G16490.1	Thale cress	cytosol	34.91	47.3
KRH41488	Soybean	cytosol, mitochondrion	39.09	47.25
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	33.59	46.95
CDY67178	Canola	cytosol, mitochondrion	34.35	46.65
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	32.07	45.8
KRH48992	Soybean	endoplasmic reticulum	29.03	45.27
PGSC0003DMT400000953	Potato	cytosol	30.17	43.68
Bra014304.1-P	Field mustard	cytosol, mitochondrion	23.91	43.45
CDY46537	Canola	cytosol, mitochondrion	23.91	43.45
PGSC0003DMT400042595	Potato	nucleus	12.52	43.42
AT4G29150.1	Thale cress	mitochondrion	32.83	43.36
CDY53440	Canola	mitochondrion	23.72	43.1
CDY30233	Canola	mitochondrion	31.69	43.04
Bra024161.1-P	Field mustard	mitochondrion	31.5	42.78
AT1G51960.1	Thale cress	cytosol, mitochondrion	28.46	42.73
CDY47784	Canola	mitochondrion	30.93	42.01
CDY45643	Canola	cytosol	24.86	40.18
Bra030407.1-P	Field mustard	cytosol	25.05	39.17
KRH23382	Soybean	cytosol	26.57	36.84
KRH09951	Soybean	cytosol	26.19	36.51
HORVU3Hr1G070750.1	Barley	mitochondrion	16.7	35.2
HORVU3Hr1G070760.1	Barley	mitochondrion	21.63	30.08
HORVU2Hr1G106550.2	Barley	mitochondrion	24.29	29.49
HORVU4Hr1G073480.2	Barley	cytosol, mitochondrion	24.67	28.57
HORVU6Hr1G003870.1	Barley	cytosol, mitochondrion	16.51	28.25
HORVU4Hr1G056380.1	Barley	cytosol, mitochondrion	17.65	27.84
HORVU0Hr1G005320.2	Barley	cytosol	18.6	26.92
HORVU5Hr1G093430.4	Barley	cytosol	23.91	26.92
HORVU1Hr1G075880.4	Barley	cytosol	17.08	26.09
HORVU5Hr1G050840.5	Barley	cytosol, plastid	23.91	22.66
HORVU7Hr1G082120.1	Barley	cytosol	17.65	21.38
HORVU2Hr1G106540.1	Barley	cytosol, nucleus	11.01	19.21
HORVU1Hr1G080360.4	Barley	mitochondrion	16.7	14.94
HORVU3Hr1G067750.8	Barley	cytosol, plastid	14.8	14.03
HORVU4Hr1G081190.1	Barley	mitochondrion	8.92	12.08
HORVU2Hr1G109850.3	Barley	nucleus	14.42	10.63
HORVU2Hr1G124440.1	Barley	cytosol	0.19	1.64

Protein Annotations

EnsemblPlants:HORVU1Hr1G028250.6	EnsemblPlantsGene:HORVU1Hr1G028250	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF27	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI000294A4AC	UniProt:M0WNH0
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:151340638..151343650

Molecular Weight (calculated)

56491.2 Da

IEP (calculated)

11.137

GRAVY (calculated)

-0.418

Length

527 amino acids

Sequence
(BLAST)

001: MLGFVRKWVP SWRRVDSSLF ISNPTPSTRP LPLPSLIQTS HSFTHTCHCS RGSLASTPPP LAVRPESSGP AMGKAARWIR GFLGGGGKKE QSKDQKPIPP
101: ASNAKRWSFG KSSRDSAEAA AVAAATPAHG GNAAMARAAE AAWLRSVYDE TEREQSKHAI AVAAATQAAA DAAVAAAHAA VAVVRLTNKG RAAHAGEHRG
201: PAAAAVRIQT AFRGFLAKKA LRALKALVKL QALVRGYLVR KQAAATLQSM QALVRAQASM RAHRAVASAA LPQLHHSSFR PRRSLQERYT DDTRSEHGVA
301: AYSRRLSASI ESSSYGYDRS PKIVEMDTGR PKSRSSSRRA SSPLLDPCEE WCAAANPMAS PLLPCHMPGG APPRIAVPTP GHLPEYDWCA MEKARPATAQ
401: CTPRYMNTPA TPTKSVCGGG GYSASSLLNC PSYMSSTQSF EAKVRSHSAP KQRPEPPAAA STNRKRVPLS EVVVVESRAS LSGVGMQRSC NRVEEAFNFK
501: TAVVGRLDRQ STGAIENDRQ AFLQRRW

Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Arabidopsis Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.